Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00134 ATGAAGAAGATCGAACAAGATCCATCCTCAAACTCGAATTCCATCAAGCCTATTGATTGTGTGAAGCTATCAAAAGACGATTCAATTCACGGATCAAAGGTGCCAAAACACGGTTTTTTTAGCAATATACAAGTTGGTTCATCATATTGTTTTTCTAAGAACAAGGAAGAAAAAAGTGAGAAAAACAAAGACGAGAAGAATTTGGACTCAAGGTCTTTTTCATGCTTATTTTGCAAGAGAAAATTTTCTACTTCACAGGCGTTAGGAGGACACCAAAATGCTCATAAGGCGGAACGTGCGTTGAAAAAGCAACGTAAACTAAGGTATGATTTAGGTTTAGGACAACCTCACTTTAACCCTTATTTTAGTTACCCAAATAGCTTTTTTACATCCCCATATTATCGAGAACTCGATGTTAGAATGGAATCTATGATTCAAAAACCATCTTACATTAGCCCTAGGATTACCTCACATAGTTTTGGCCCTTTTGGGTATAGTAATGGTGCTTTGGGTTTGCAAGAGATGTTAAACCCGTCTCTTGTTAGTTTGAGAAATATAGAGGGTAGTAATAATAATAGTGGAGTTGGGGTTCTAGGTATTGGTGGTGGAACTACTTCAAGGATTGAAGATAGCACAAATAACAAAATTTGTGGCATTCTAAAGTGCGGAGGTTCTTCCAAAAATGTTGCTTCAAGTTCAAACTCAATCATAGATAATAAAAACGCTAGGATTATCCCAAATGGTTTTGGTCCTTTTGGGTATAGTAATGGTGCTTTGTGTTTGCAAGAGATATTAAACCCTTCTCTTCCTCTTGTTAGTTTGAGAAATATGGAGAGTAGTTATAATGGGGCTGGAATTCTAGGTATTGGTGGTGGAACTACTTCAAGGATTGAAGATGACACAAATAATAAAATTGGTGCTATTTTTAAATGGGGCGATTCTTCTAAAAATGTTCCTACAAGTTCAAACACAATCATAAACAATAAAAATATTGTGGATGCTACTACTACCAAGAATGATATTGATCGGTTGAAGTCAAACGCCAAAGAAGAATCCTCCTATTATGATTCATGTGGGCTTGATTTGTCACTTAGACTTTAA 1101 0.3588 MKKIEQDPSSNSNSIKPIDCVKLSKDDSIHGSKVPKHGFFSNIQVGSSYCFSKNKEEKSEKNKDEKNLDSRSFSCLFCKRKFSTSQALGGHQNAHKAERALKKQRKLRYDLGLGQPHFNPYFSYPNSFFTSPYYRELDVRMESMIQKPSYISPRITSHSFGPFGYSNGALGLQEMLNPSLVSLRNIEGSNNNSGVGVLGIGGGTTSRIEDSTNNKICGILKCGGSSKNVASSSNSIIDNKNARIIPNGFGPFGYSNGALCLQEILNPSLPLVSLRNMESSYNGAGILGIGGGTTSRIEDDTNNKIGAIFKWGDSSKNVPTSSNTIINNKNIVDATTTKNDIDRLKSNAKEESSYYDSCGLDLSLRL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00134 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Mepo1g00134 366 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 196 IPR044246 GO:0009788
Mepo1g00134 366 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
Mepo1g00134 366 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00134 Mepo-Chr1 1176476 1177576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00134 70 125 C2H2 Transcription Factor Family AT5G01860 55.357 6.37e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00134 - - psat:127081686 263.077