Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00130 ATGGAGGTAATAGTTCCTAGACAAGAACAGTCAAATCAATGTTCCGAGGATATGTTGAAGTTCTCTGGACGCGCAAAAGCTTTTGGAAATTCAAAGAGAAAGGCTGAAGAATTTCATGAGTGTGGTGGTAATGAGAAGCCGGAACCAGAAGGAAAAGGAAATACTATGGGATGTTTGAAGGAGGATACAGTTTCACAAGAAAATTTTGGAGTTTCATATGAGAGAAGATTTCAAGAATATCATACACATCATACCGATACAAATTCAAAAGGGGAGAAAGATGTTCTGGAATGTTTAGAAGAGACACCCAATCTAGCATCTAAGAAGAGAGACGGACCAAAGAAGTTTGCTGCCTCAAAGAAGAAACGGAAACTTGAAGACAAACTCTTGCTTGACGAACTTGAACAAGATGAAGAAATGCTTTTTCTTCTGAAGACAAAGAACAGGAGCAGAGCTGGTAGAATCAATAACATAATGGGTGTTCAACAAAATACCCGGAAATGTCATCAGTGCATGAAAAAGGAAAGAACATCTTTTGTGCCTTGCACTAAATGTTCAAAAATGTACTGTATGCGATGCATCAACCAATGGTACCCTGATATGTCTATAGAAGAAGTTGCTGAAAGTTGCCCATTTTGCATTAAAAATTGCAACTGCAATGTTTGCCTGCGTTCAAAAGGAACAATTAAGACATCTAACATGGACATCACCAATTATGAAAAAGCTCAGTATCTGCATTACATGATCAACTTACTCCTTCCATATCTGAAACAAATTTGTCATGAACAAAGTGTGGAGGAAGATATAGAAACAAAAATACAAGGAAAATCTTCTGAGATTGAGATACCACAAAGTCTTTGTGGTGACAAGGAACGTGTCTATTGTGATCATTGTGCTACTTCAATCGTTGACCTTCATCGAATCTGCCCAAATTGTTCCTATGAGCTTTGCCTCAAATGTTGCAAAGAAATACGTGATGGAAGCATTACACCCCGAGCTGAGATGAAGTTCCAATATGTGAATAGGGGCTATGATTATATGCATGGTGGTGACCCTCTACCAGTGTCTTGTGATTTAGAGACTTCAGATTGTCATATATCTACCGAGTGTAATGCCAGGAGTGATGGAAGTGTTAGTTGTGCCCCAAAAGAAATGGGGGGTTGTGGTAGTTCTCTGTTGGAGCTGAGGCGCATCCTCCCACATGGGTGGATGTCTGACTTGGAAGACAAAGCTCGCAGTATGCTGAAAATTTGGGAAATTGAACAAACTACTCTTCAGCATGAAGAAGCTGTATCGAGCTATGGTTCAGAATCAAAAAGCAGTTTAAAAGAAGGGATGTTGCTCTTCCGAAAACATTGGACAAATGGTGAACCAATTATTGTTCGTGATGTTCTAAAACATGGGACAGGTCTGAGCTGGGAGCCGATGGTCATGTGGCGAGCATTGTGTGATAATGTGGCTTCAGGTATCAGTTCAAAAATGTCAGAAGTGAAGGCCATCGATTGCATGGCTAATTGTGAGGTTGCAATTAATACTCGTATGTTCTTTAAAGGTTATATAGAGGGAAGAACATATAGAAATCTCTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCCCCTTCTGATAAATTTGAAGATCTTTTGCCCCGTCATTGTGAAGAATTTATTCGTTTCTTGCCATTTCAACAGTATACTGATCCCCGGGCTGGAACTCTCAATCTGGCTGTAAAGTTGCCAGCCCATGTTCTAAAACCTGATATGGGTCCAAAAACATATATTGCTTATGGGATTAGAGAAGAACTTGGCAGGGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGCGGAGGTATTATTAACTGATAGGCAGAAGTCTACTATTTCCAATTTGAAAGAAGCACACAGAGCACAAGATGAGAGAGAACACCGTGCTGAGAGGGCTGATGTATGCCTTAATGGTCGACCTTGCGACAACAGAGAACATATAGAAAATAAGGAGGTATTAGAATGCAACAATATGGATAACCATCCTATCGAAATCAGTGGAGATATCTTTCATAATGTGTCTGAGGGGGAAACTTTTCCTGCCATTTCTACAGAAAATGAAACAATGGTAACAGGTAGTGCCCTGTGGGATATATTTCGGAGAGAGGACACTGAAAAGTTAGGAGCATATCTTAGAAAACACTCGAAAGAATTCAGGCATACTTATTGTTCACCGGTTGAGCAGGTTGTACATCCAATTCATGACCAATGTTTTTATTTGACTTTGGAGCACAAGAAGAAGTTGAAGGAGGAATTTGGGGTAGAACCGTGGACTTTTGAGCAAAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTTAAGTCGTGCACAAAGGTTGCTGTAGACTTTGTGTCCCCAGAAAATGTACATGAGTGTCTTCGTTTAACTGAAGAATTCCGTCAGCTTCCCAAGAAACACAAAGCTAGAGAAGATAAACTTGAGATACAGAAGATGATAGTTTATGCCGTTGATCAAGCTGTCAAAGACCTAGAAGCTTTACTGAATTGTTCCTGA 2610 0.4031 MEVIVPRQEQSNQCSEDMLKFSGRAKAFGNSKRKAEEFHECGGNEKPEPEGKGNTMGCLKEDTVSQENFGVSYERRFQEYHTHHTDTNSKGEKDVLECLEETPNLASKKRDGPKKFAASKKKRKLEDKLLLDELEQDEEMLFLLKTKNRSRAGRINNIMGVQQNTRKCHQCMKKERTSFVPCTKCSKMYCMRCINQWYPDMSIEEVAESCPFCIKNCNCNVCLRSKGTIKTSNMDITNYEKAQYLHYMINLLLPYLKQICHEQSVEEDIETKIQGKSSEIEIPQSLCGDKERVYCDHCATSIVDLHRICPNCSYELCLKCCKEIRDGSITPRAEMKFQYVNRGYDYMHGGDPLPVSCDLETSDCHISTECNARSDGSVSCAPKEMGGCGSSLLELRRILPHGWMSDLEDKARSMLKIWEIEQTTLQHEEAVSSYGSESKSSLKEGMLLFRKHWTNGEPIIVRDVLKHGTGLSWEPMVMWRALCDNVASGISSKMSEVKAIDCMANCEVAINTRMFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCEEFIRFLPFQQYTDPRAGTLNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTAEVLLTDRQKSTISNLKEAHRAQDEREHRAERADVCLNGRPCDNREHIENKEVLECNNMDNHPIEISGDIFHNVSEGETFPAISTENETMVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTEEFRQLPKKHKAREDKLEIQKMIVYAVDQAVKDLEALLNCS 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00130 869 CDD cupin_RmlC-like 756 816 - -
Mepo1g00130 869 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 163 234 IPR018866 -
Mepo1g00130 869 Pfam JmjC domain, hydroxylase 712 815 IPR003347 -
Mepo1g00130 869 ProSiteProfiles Zinc finger RING-type profile. 168 213 IPR001841 -
Mepo1g00130 869 SUPERFAMILY Clavaminate synthase-like 448 867 - -
Mepo1g00130 869 ProSiteProfiles JmjC domain profile. 567 832 IPR003347 -
Mepo1g00130 869 SMART cupin_9 548 832 IPR003347 -
Mepo1g00130 869 Gene3D Cupin 437 841 - -
Mepo1g00130 869 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 57 866 IPR045109 GO:0032454|GO:0033169
Mepo1g00130 869 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00130 Mepo-Chr1 1139441 1145107 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo1g00130 JmjC 1.7e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00130 K15601 K21989 gmx:100797860 1212.59