Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00126 ATGATAATGCTTCCTGGTGTCCAAAACTCACATATGGAAGAACTTATTTGTGTTGAAAATCGTCAAGATGACATTTTCAAATTTGATGAAGAACTCATTGATGTTCAATGCGAAACATCACAAAACAACAATAGAGAAGAAGCAGAACTATCATTTTCTGAATGGTTGGAGGTGGATGAGCCTCTGGCTGTGTGGTTCAAGTGGAAAGAGAATTGGCATGCAGGAATCAAATGTGCAAGGGCTGATTGGCCATTACCAACTATAAAAGCCAAACCAACTAATGATAATGAGCAGAACAAATATATTGTCATTTTTTCGCCAGAAACAAGGAATTATTCATGGGTTAATATGCTTCTTGTTAAATCAATTGATGAGTTTCCTCAACCTATACCATATGAAACTCATCATGAAGGATTGAAAATGGTACAAGACTTGACGATTGCGCGACAATTTATAATGCAAAAGCTCGCTGTCGAAATGCTCTACATTATTAATCAGTTTCATTTTAATGCTTTGATAGAAGCAGTTCGTAATGTGATGGTTTGGAAGCAGTTTGCTATGGAAGCTTCTCATTGTCGTCGTTATTTAGATCTTGGAATAATGGTTCAGAGGTTGCAAAAGAACATAATGCATTGCTACATAAAAGATTATTGGAAACTACATTCATCTGATTCTTGGGCTGAAAGATGCCAAAGTGCAAACAATGCTCAAACAGTAGAGCTGCTTCAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCCACACTCTCCGTGATGCACCGGCACAACAAAACTTAGGTTTTGAGTGGAATACATGGAACCATGATGTGATGAAATGGTTTTCCACATTTCTTTCCTTTTCTAGTAGCAGTGACACGCAACAGCATGCTTCTGGCTCTGATGGTATGCCCCAAGCAAGCCTTCAAGTTGGCAGCAAAAGGCCTAAACTTAAAGTTCATCGCGCATATACACATTCTAGGCAAGAAGATACTGTGGAGGTACCCATGGTAACTGAGTTTCCTAGTCAACTGATCAGCCCAGTGAGTGAAACCGTAGTTCAGTCTGTAGATTCTGAGATCTTGTTCAGCAAAGGAACAATATCAAGGCCTTTGGATGAAACGGTTGTTCAAATATCTGAAGAACATGATACTAAGGAAGGGATTTTGTATCGAAAATGTCAAGCATATGTCGAATCCAAGGGAAGACGGTGTGTAAGAATGGCAATTAAAAATGATATATATTGCTGTGCACATTTTTCAAAAAAGAAAGAAAAAAGTGTTAAAGTTCTTACTCCATATTGTGGAGGAACAACTATTGATGGTTCTAGATGTAAGAATCATTCTCTTCCCAGTTTCACCTTTTGCAAGAAACATCTCTGCATTGCCGACAGAAACAACCGTTCAAATTCAAACTGTCATATGTTGAAGAGGAAATTTGAAGAAAGTTGTAGTGGTAAAAAAAATCCATTGGAGATCGATACAGGGTTGATCATCGATGATGATGATTCTTTTTGTGCAAAGAATATCTTAGGTGAAACGCTCATGCTTTCCGGTAATGATCACAATGAAATCGATGCTCTTCGGCAGACAGAGTCTTCTACCCATGGTAATGATCATAATAAAGACTCTTGTTTTCATAATGAGAATGTTAATAAGTGTAAGATTTGCTTTGAAGAATTTGATAATGACCAAACACTTGGCGATCATTGGATGGAAAATCATAAAAAAGAAGCACAATGGTTATTTAGAAGTTATGCTTGTGCCCTTTGTTTTAATTCCTTCCCTAACAAGAAGCTATTGGAATCACATGTTCAGAAGGGACACTGTGTGAAATTTGATGAAAACTGCTTGCTTTTACTATGTATTCCTTGTGGCGAATATTTTGGAAATATGGAGGAATTATGGTTGCATGTTAAGTCAGTTCACCCTGCCGAACTTAAGCTTTCAAAATCTCCTAAGCAACTAAGTTTGTCTACCGGTGATGCTTCTCTGAAAGTGACCAGGAAAGGAAATGAAATGGGGGAAACATCCATGCAGCAGCCCCAATGCTTAGAAGTTGCAAATATTTTCTCTTCTGATATTCAGAAGACTAGGGATCAGCCTAATAATCTTGATATTATATCAAACGCTTGCACTGCATGTTGTAAACAAAACTTGACGGAAAAATCTACAAATGCATCAGATCCTGCAAGTGTTGTAATGGAGCAAGATGAGTCTCAGTCCATCATAAATTCAAATCATGCAAGATTAGGGTCATCGCAAAAGGCTCTAGTATTATGTGATGACATAAGTTGTGGGATGGAATCAACTCCAGTGATTTGTGTAGTAGATCAAAAAATACTAAACTCTCTTTTTGAGCAAGGAGAGCAATATATAAATCTTGCTAGGCCTTGGATGAACTTTACCTATGTGACAAAACCAATGCTTGGTCCATCGACTAGTCTTGAATATGAGGTTCAGCAACTGAAATGTTATTGCTCATCTTCTACCTGTTGTTGTGAAACTTGTGATCATGTATACCTTTTTGATAATGATTATGATACTGCAAAAGACATATTCGGAAAAACAATGCACAAAAAGTTCCCATATGACAACAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTGTATGAGTGCAACGATAAGTGCAGATGTGATAAAACCTGTCCAAACAGAATACTGCAGAATGGAATTCGCATTAAGCTGGAAGTGTTTAAAACAGAGAAAAAGGGATGGGGTGTAAGGGCTGGCGAGGCTATTTCGCGCGGAACATTTGTGTGTGAGTACATTGGAGAGGTTTTAGACGAGCAAGAGGCACACAACAGACGCAAAAGTTATGGAAAAGAACATTGCTGTTATTTCTATGTTGTTGATGCTCGTGTTAATGACATGAGTCGATTGATCGAAAGACAGGCCCGACATATCATTGATTCTACTAGATATGGAAATGTGTCTCGATTCATTAATAATAGTTGTTCACCAAATCTTGTGAGTTACCAAGTTCTTGTGGAGAGCATGGATTGTAAGCATTCACGTATTGGTCTCTACGCAAGTCGAGATATTGCTTTTGGTGAAGAACTGACATGTAATTATCACTATGAGCTTGTTCTTGGAAATGGATCTCCTTGTCTTTGTGGATCTTCAAAATGCCGAGGACGCCTTTACTAG 3174 0.3793 MIMLPGVQNSHMEELICVENRQDDIFKFDEELIDVQCETSQNNNREEAELSFSEWLEVDEPLAVWFKWKENWHAGIKCARADWPLPTIKAKPTNDNEQNKYIVIFSPETRNYSWVNMLLVKSIDEFPQPIPYETHHEGLKMVQDLTIARQFIMQKLAVEMLYIINQFHFNALIEAVRNVMVWKQFAMEASHCRRYLDLGIMVQRLQKNIMHCYIKDYWKLHSSDSWAERCQSANNAQTVELLQEELFDSILWNDVHTLRDAPAQQNLGFEWNTWNHDVMKWFSTFLSFSSSSDTQQHASGSDGMPQASLQVGSKRPKLKVHRAYTHSRQEDTVEVPMVTEFPSQLISPVSETVVQSVDSEILFSKGTISRPLDETVVQISEEHDTKEGILYRKCQAYVESKGRRCVRMAIKNDIYCCAHFSKKKEKSVKVLTPYCGGTTIDGSRCKNHSLPSFTFCKKHLCIADRNNRSNSNCHMLKRKFEESCSGKKNPLEIDTGLIIDDDDSFCAKNILGETLMLSGNDHNEIDALRQTESSTHGNDHNKDSCFHNENVNKCKICFEEFDNDQTLGDHWMENHKKEAQWLFRSYACALCFNSFPNKKLLESHVQKGHCVKFDENCLLLLCIPCGEYFGNMEELWLHVKSVHPAELKLSKSPKQLSLSTGDASLKVTRKGNEMGETSMQQPQCLEVANIFSSDIQKTRDQPNNLDIISNACTACCKQNLTEKSTNASDPASVVMEQDESQSIINSNHARLGSSQKALVLCDDISCGMESTPVICVVDQKILNSLFEQGEQYINLARPWMNFTYVTKPMLGPSTSLEYEVQQLKCYCSSSTCCCETCDHVYLFDNDYDTAKDIFGKTMHKKFPYDNNGRIILEEGYLVYECNDKCRCDKTCPNRILQNGIRIKLEVFKTEKKGWGVRAGEAISRGTFVCEYIGEVLDEQEAHNRRKSYGKEHCCYFYVVDARVNDMSRLIERQARHIIDSTRYGNVSRFINNSCSPNLVSYQVLVESMDCKHSRIGLYASRDIAFGEELTCNYHYELVLGNGSPCLCGSSKCRGRLY 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00126 1057 Gene3D SET domain 739 1038 IPR046341 -
Mepo1g00126 1057 SMART preset_2 761 886 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g00126 1057 ProSiteProfiles Pre-SET domain profile. 823 899 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g00126 1057 MobiDBLite consensus disorder prediction 294 308 - -
Mepo1g00126 1057 Pfam Zinc finger C2H2-type, 3 repeats 588 672 IPR040689 -
Mepo1g00126 1057 ProSitePatterns Zinc finger C2H2 type domain signature. 588 609 IPR013087 -
Mepo1g00126 1057 Pfam SET domain 913 1033 IPR001214 GO:0005515
Mepo1g00126 1057 ProSitePatterns Zinc finger C2H2 type domain signature. 622 643 IPR013087 -
Mepo1g00126 1057 SUPERFAMILY SET domain 751 1047 IPR046341 -
Mepo1g00126 1057 Gene3D Classic Zinc Finger 552 609 - -
Mepo1g00126 1057 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 722 1057 - -
Mepo1g00126 1057 ProSitePatterns Zinc finger C2H2 type domain signature. 554 575 IPR013087 -
Mepo1g00126 1057 Pfam Pre-SET motif 767 894 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g00126 1057 ProSiteProfiles Post-SET domain profile. 1041 1057 IPR003616 -
Mepo1g00126 1057 MobiDBLite consensus disorder prediction 294 314 - -
Mepo1g00126 1057 ProSiteProfiles Zinc finger C2H2 type domain profile. 620 648 IPR013087 -
Mepo1g00126 1057 SMART set_7 902 1040 IPR001214 GO:0005515
Mepo1g00126 1057 ProSiteProfiles SET domain profile. 902 1034 IPR001214 GO:0005515
Mepo1g00126 1057 SMART c2h2final6 552 575 IPR013087 -
Mepo1g00126 1057 SMART c2h2final6 620 643 IPR013087 -
Mepo1g00126 1057 SMART c2h2final6 586 609 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00126 Mepo-Chr1 1085159 1096281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00126 580 666 C2H2 Transcription Factor Family AT2G23740 47.126 1.45e-19 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo1g00126 Pre-SET 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00126 - - mtr:11444185 1981.07