Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00102 ATGGTTATTTATTCATGTTTGTTGTTTGCTGCTGCTGTTGTTGTTGTTACAGTTAGAGAGTCTTCCTGCAATGGTGGCTATGGTCTGGCTGTGTGGGCATTGGGAAACATTGTCGGCGATTCCCCTAGGTGCCGTGATCTTGTTTTCAGTCACGGTGCGCTGATCCCGCTGTTAACCCAGTTGAATGAGCAAGCAAAGCTTTCTATGCTGAGAGTTGCCACGTGGACCCTGTCAAGCTTTTGCAAAGGCAAGCCACCACCTCCGATTGAGCAGACTATTATCAATCATGGTTCACTCCCATGCCTTTTGAGTCTCTTGACACATTATCACGACAAAAGTGTTAAGAAAGAAGCTTGCTTGACTATATCCAACCTTGCAGCTGGAAACAGAGAGCAGATACAAGCTGTTATTGAAGCTGGTCTGATTGCTCCCCTAGTAAATCTACTTCAAAATGCCGAGTTTGAAGTTCAAAAAGAAGCTGCATGGGCATTATTTAATGCCACATCTGGTGGTACCCATGAGCAAATCAAGTACTTGGTGACCCAGGGTTGCATTAAACCTCTGTGTGATTTGCTTGTTTGCCCTGATCCAACAATTGTTGTTGTCTGCTTAGAAGGTCTTGAGAATTTTCTGAAAATTGGAGAAGCGGAGAAAAACTTTTGTAACATGGGAGATGTCAACTTGTATGCTCAAATGATAGATGATGTTGAGGGATTGGAAAAGATTGAAAACTTGCAGAGTCATGACAACTATGAAATTTATGAGAAGGCTGTTCAAATTGTCGAGACATATTGGTTGGAAGGTGAGACCCTACCTCGAGGCCATGGTAGACAAGATCGGGATCTGAAACGTAAAATCCTACGCTTCTACGGTCTATGCACCCCTTGGTGTGCTCGTGTATGGTCGAAATCAAAATTTATTGGCCGCGGTCAGGGTAGCCGCGAAAAATCGTGGAAGCAGCTGTAG 966 0.442 MVIYSCLLFAAAVVVVTVRESSCNGGYGLAVWALGNIVGDSPRCRDLVFSHGALIPLLTQLNEQAKLSMLRVATWTLSSFCKGKPPPPIEQTIINHGSLPCLLSLLTHYHDKSVKKEACLTISNLAAGNREQIQAVIEAGLIAPLVNLLQNAEFEVQKEAAWALFNATSGGTHEQIKYLVTQGCIKPLCDLLVCPDPTIVVVCLEGLENFLKIGEAEKNFCNMGDVNLYAQMIDDVEGLEKIENLQSHDNYEIYEKAVQIVETYWLEGETLPRGHGRQDRDLKRKILRFYGLCTPWCARVWSKSKFIGRGQGSREKSWKQL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00102 321 SMART arm_5 40 82 IPR000225 GO:0005515
Mepo1g00102 321 SMART arm_5 86 127 IPR000225 GO:0005515
Mepo1g00102 321 SMART arm_5 129 169 IPR000225 GO:0005515
Mepo1g00102 321 SMART arm_5 172 212 IPR000225 GO:0005515
Mepo1g00102 321 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 97 140 IPR000225 GO:0005515
Mepo1g00102 321 Pfam Armadillo/beta-catenin-like repeat 90 127 IPR000225 GO:0005515
Mepo1g00102 321 Pfam Armadillo/beta-catenin-like repeat 173 209 IPR000225 GO:0005515
Mepo1g00102 321 Pfam Armadillo/beta-catenin-like repeat 129 168 IPR000225 GO:0005515
Mepo1g00102 321 Pfam Armadillo/beta-catenin-like repeat 41 81 IPR000225 GO:0005515
Mepo1g00102 321 Pfam Atypical Arm repeat 227 268 IPR032413 -
Mepo1g00102 321 PANTHER IMPORTIN ALPHA 30 91 - -
Mepo1g00102 321 Gene3D - 91 266 IPR011989 -
Mepo1g00102 321 Gene3D - 18 90 IPR011989 -
Mepo1g00102 321 SUPERFAMILY ARM repeat 29 264 IPR016024 -
Mepo1g00102 321 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 140 168 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00102 Mepo-Chr1 887892 890999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00102 93 239 U-box Gene Family AT2G23140 27.703 7.52e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00102 K15042 - aew:130760376 327.02