Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00076 ATGCAAATGTCTCAGCAAAGGCCAAATTCAGCTGGTCTCGGTTTCTATCACCAACCTGCGCAGGGCATTTACCTACAAACCAATCTATGTGCTGATGGTAGCAGCAGCCAGGGAACCGAAATTTCTTTTGAAACCTGCAAGCAGCAACACTTCACCCTGGAATCATACCCAGAAATCACCGGTTTCATAGATTGTGATTCTCCTTCCTATGCCAGTGTATCATCTAACAAGACTCCATTTTCTCCACAAGAGTCTCAATCGTGGCATTCAGATCATCACCAATCATCTGACAACACCTATGGATCCCCGTTAAGCGGTATGTCCAGTGTTGACGATGGGAATGATTTGAAGCACAAACTTAAAGAAATAGAGAATTCATTGTTGGGGCCTGAGGATTTTGATATTGTTGACAGTTACGGCAGCTGCATGGAGACTAGCTTCCACGGAACATCTCCATCAGCTAATTATAATTGGGCTATGATTGCCGAAAACATTCCAAAGCTTGACATGAAAGAAGTCCTCTTGCTATGTGCACGAGCTGTCATTGATGGTGATATTCCAACAGCAAGAGGCTGGATGGATAATGTACTGGTTAAGATGGTATCGGTTGCTGGGGATCCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCAAGATTAGAATTGTCCGGAAGCTTGATCTACAAGTCGTTGAAATGTGAACAACCAACGAGCAAAGAGCTAATGACTTACATGCACATGTTGTATCAGATTTGTCCATATTTTAAGTTTGCATACATATCTGCAAATGCTGTTATTTCTGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTCCAAATCGCACAGGGAACACAATGGCAAATGCTTATTGAAGCGCTTGCACGCAGGCCCGGTGGACCACCTTTTATTCGAATAACAGGGGTCGATGATTCACAATCATTTCATGCGCGCGGTGGAGGACTTCAGATTGTAGGAGAACGACTTTCAAACTTTGCCAGGTCTCGTGGAGTTCTGTTTGAGTTCCACAGCGCTGCAATGTCCGGTTGCGAAGTTCAACGAGAAAATCTTAGAGTTAGTCCTGGAGAAGCCCTTGCCGTAAATTTTCCCTTTAGTTTGCACCATATGCCGGATGAGAGTGTAAGCATAGAGAATCATAGAGACAGATTGTTGAGATTGGTTAAGAGTTTGTCGCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAATACTTCTCCTTTTTATCAAAGGTTTGTGGAGACAATGGATTATTACACAGCTATGTTTGAATCAATAGATGTTGCTTGCACCAAAGACGATAAGAAGCGGATTAGTGTAGAGCAGAACTGCGTGGCACGGGACATTGTCAACATGATAGCCTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAAGTTTTTAGAAAGTGGAGGTCGAGATTTTCCATGGCAGGATTTAGACAATGCCAATTGAGTTCTTCAGTGATGCATTCTGTCCAAAATATGTTGAAGGACTTCCATCAAAATTATAGACTTGAACATAGAGATGGTGCTCTCTATCTTGGTTGGATGAAAAGAGCTATGGCCACCTCTTCTGCTTGGATGTGTTAG 1629 0.4316 MQMSQQRPNSAGLGFYHQPAQGIYLQTNLCADGSSSQGTEISFETCKQQHFTLESYPEITGFIDCDSPSYASVSSNKTPFSPQESQSWHSDHHQSSDNTYGSPLSGMSSVDDGNDLKHKLKEIENSLLGPEDFDIVDSYGSCMETSFHGTSPSANYNWAMIAENIPKLDMKEVLLLCARAVIDGDIPTARGWMDNVLVKMVSVAGDPIQRLSAYLLEGLRARLELSGSLIYKSLKCEQPTSKELMTYMHMLYQICPYFKFAYISANAVISEAMANESRIHIIDFQIAQGTQWQMLIEALARRPGGPPFIRITGVDDSQSFHARGGGLQIVGERLSNFARSRGVLFEFHSAAMSGCEVQRENLRVSPGEALAVNFPFSLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFYQRFVETMDYYTAMFESIDVACTKDDKKRISVEQNCVARDIVNMIACEGVERVERHEVFRKWRSRFSMAGFRQCQLSSSVMHSVQNMLKDFHQNYRLEHRDGALYLGWMKRAMATSSAWMC 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00076 542 Pfam GRAS domain family 171 540 IPR005202 -
Mepo1g00076 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 114 534 IPR005202 -
Mepo1g00076 542 ProSiteProfiles GRAS family profile. 161 541 IPR005202 -
Mepo1g00076 542 MobiDBLite consensus disorder prediction 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00076 Mepo-Chr1 670599 673931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00076 1 540 GRAS Transcription Factor Family AT4G17230 57.827 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo1g00076 GRAS 1e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00076 - - gmx:100776109 837.025