Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00075 ATGAAGGCTTTGATTCTAGTTGGGGGGTTTGGAACTAGGTTGAGGCCATTGACTCTCAACTTCCCTAAACCTCTTGTTGATTTTGCTAACAAACCCATGATTCTGCATCAGATAGAGGCTCTTAAGGCCACCGGAGTTACTGAAGTGGCACTGGCCATCAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGAAGTTTGAAGCAAAGCTTGGCATTAAGATTAGTTGTTCGCAAGAAACTGAACCATTAGGAACTGCAGGCCCTCTGGCGCTAGCTAGGGACAAGCTGATAGATGATTCCGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCTGTGAGTACCCACTTAAACAAATGATTGAATTCCACAAATCCCATGGAGGGGAGGCTTCCATAATGGTAACAAAGGTTGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAAACAACAGGGCAGGTTGAGAAATTTGTTGAAAAACCTAAATTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACCTATTGAACCCCTCTGTTTTGGATCGGATTGAACTGAGGCCCACTTCTATTGAAAAAGAAATTTTTCCCAAGATCGCTGCGGAGAAAAAGCTATATGCAATGCTCCTGCCAGGATTTTGGATGGACATTGGACAACCTAGGGACTATATCACTGGCTTGAGGCTTTACCTGGACTCACTGAGGAACAGGTCTTCTTCTAAGTTGGCCAGTGGCTCTAACATTGTGGGGAATGTCATTGTGGATGAAACAGCAAAAATCGGTGAGGGATGTCTCATTGGACCTGATGTTGCTATAGGTCCTGACTGCATTGTTGAGCCTGGTGTGAGGCTCTCGCGCTGCACAGTAATGCGAGGAGTCCGGATTAAGAAACATGCTTGCATATCCCACAGTATTATTGGGTGGCATTCCTCTGTTGGGCAATGGGCTCGAGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTATGTGATGAGATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATTAAGTCGAATATTCTGAAGCCAGAGATTGTCATGTAA 1086 0.4401 MKALILVGGFGTRLRPLTLNFPKPLVDFANKPMILHQIEALKATGVTEVALAINYQPEVMLNFLKKFEAKLGIKISCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVICEYPLKQMIEFHKSHGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPKIAAEKKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRNRSSSKLASGSNIVGNVIVDETAKIGEGCLIGPDVAIGPDCIVEPGVRLSRCTVMRGVRIKKHACISHSIIGWHSSVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00075 361 FunFam mannose-1-phosphate guanyltransferase beta 1 232 - -
Mepo1g00075 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058
Mepo1g00075 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 228 IPR029044 -
Mepo1g00075 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Mepo1g00075 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Mepo1g00075 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 360 - -
Mepo1g00075 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
Mepo1g00075 361 Gene3D Hexapeptide repeat proteins 229 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00075 Mepo-Chr1 651361 655204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00075 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 23.116 2.39e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00075 K00966 - gmx:100777120 674.085