Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00063 ATGGGCAGTGATGAAGCTCAACAGCTATTGCTTTCAGAGTCAAGGGAACATTCTCATCTCAATGAGAAGAGTGACCTTCTTCAGAGAAGAAGACCGCGGCGTGGCGGCACTTCAGAGACAGATATCAATCTGCAGCAAGAACAGAATGGTGTCCTCCAAACCCCTTTATCTCCACAATGTATAACTGAAAAACAAGAAGCAGAATTCAAGTTCAGGCTAGTGTTCTTGTGTTTAGCAGCATACCTAGGCACAGGTACCTTATGTTTCTATCTAACAAGTTACCAAATTGAGGGCATAAAAACAAATGATTTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCAAATAGCACTATAGCAAAACTCATTGCATGCATTTATGTCTTCACTGGCATGGCTCTTGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAGAAACAGGAAATATTTCTTGCTGAGTCCATGTGCAAGGCTGAAAATTTTGGTCTACAAGAGATTGCTCAAGAACTTGGAACTAAGAAAAGCAAATACAAGTTTGTGGTTGCAGTAGCCACTTTTTTTGTGCTCATGATTGCAGGGACTGTTTTTCTGTATTTTATTGAGAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACGGTCACTACTTTAGGTTATGGGGATAAGAGCTTCTCGACTGCCGCCGGTAGGATTTTTGCCGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTATCTTGCTGAACTCTATACTGAAGATAGACAAAGATCATTAGCAAAAATGGTTCTCACCCGAAAATTATCACTCAGTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGTTGTCAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTCAGCAGTGATGGAGAGTTTTAGAAAACTAGACTGTGACCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATTTTGAATTCTGA 1059 0.4013 MGSDEAQQLLLSESREHSHLNEKSDLLQRRRPRRGGTSETDINLQQEQNGVLQTPLSPQCITEKQEAEFKFRLVFLCLAAYLGTGTLCFYLTSYQIEGIKTNDFLDALYFCVVTMTTVGYGDLVPNSTIAKLIACIYVFTGMALGGLILSKAADYIVEKQEIFLAESMCKAENFGLQEIAQELGTKKSKYKFVVAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKVVSAAEFVVYKLKEMGKINQEDISAVMESFRKLDCDQSGTLTEADIRNFEF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00063 352 MobiDBLite consensus disorder prediction 10 37 - -
Mepo1g00063 352 PRINTS Two pore domain K+ channel signature 230 239 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo1g00063 352 PRINTS Two pore domain K+ channel signature 113 141 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo1g00063 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 326 IPR003280 GO:0005267|GO:0016020|GO:0071805
Mepo1g00063 352 SUPERFAMILY Voltage-gated potassium channels 68 158 - -
Mepo1g00063 352 SUPERFAMILY Voltage-gated potassium channels 184 285 - -
Mepo1g00063 352 Gene3D - 178 277 - -
Mepo1g00063 352 MobiDBLite consensus disorder prediction 1 44 - -
Mepo1g00063 352 SUPERFAMILY EF-hand 292 350 IPR011992 -
Mepo1g00063 352 ProSitePatterns EF-hand calcium-binding domain. 296 308 IPR018247 -
Mepo1g00063 352 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Mepo1g00063 352 Pfam Ion channel 77 157 IPR013099 -
Mepo1g00063 352 Pfam Ion channel 199 270 IPR013099 -
Mepo1g00063 352 Gene3D - 284 351 - -
Mepo1g00063 352 Gene3D - 57 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00063 Mepo-Chr1 593138 596730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00063 53 347 Ion Channels AT5G55630 57.288 1.05e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00063 K05389 - gmx:100799492 498.819