Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g00020 ATGGCAATAGCAGCAGCAACATCATCGCCAACCATGAGTAGCATGAGCTTGAGTCACGAAGATGGAACTTCTAACGATAATAATATTAACAAAGGAGCTACAGATACAGTAGTAGATGATGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAGCTTGTAGAGTTCTATCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTATTTTTATGTGCCTCGAGATAGGAAGTATCGAAACGGTGATCGTCCTAATCGTGTAACAACTTCTGGTTATTGGAAAGCAACCGGAGCAGATAGGATGATTCGAACTGAAAACTTCCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGGTGAGATATCTCTATGTCGGGTTTACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACAAGACCATCATCATCAAGAGGTACTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCAGCAAAGACAATTGATCATGATCACATAGTTAACAAAATTGAAGGAAGCAGTAGCGGCGGTAATTCTGATCATGTCACAACCACTCTTGGGCTTTCCAAGTACAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGAGGAAGAAGGATTGATGATGATGCAGCAGCAGCAGCAGCAACATCAACCTAGGCAACTAGTACAATATGCAGCTGCGGGAAACTCTCTGTTAGTTTCTGCTTGTGGTGGTGGCGGCGGCGCCATTTTCCCTGTCTCAGCTTCAGCAGCAGCAGCAGTGAGCTGCTCCAATACTTCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTTCAATGTTCAAAACCCACATCTCAATCATCCAAATCCCAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACTACCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA 1293 0.4316 MAIAAATSSPTMSSMSLSHEDGTSNDNNINKGATDTVVDDDDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSRGTTASHSDKNKQQNEILGMGFVVGQSAKTIDHDHIVNKIEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEEEEGLMMMQQQQQQHQPRQLVQYAAAGNSLLVSACGGGGGAIFPVSASAAAAVSCSNTSTSAAMMMDDLNRLVSYQQQQYCFNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTTFSDRLWDWNPIPEDHNHPNSSNNTSFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g00020 430 FunFam NAC domain-containing protein 35 58 199 - -
Mepo1g00020 430 MobiDBLite consensus disorder prediction 1 42 - -
Mepo1g00020 430 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
Mepo1g00020 430 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Mepo1g00020 430 SUPERFAMILY NAC domain 49 195 IPR036093 GO:0003677|GO:0006355
Mepo1g00020 430 MobiDBLite consensus disorder prediction 205 232 - -
Mepo1g00020 430 MobiDBLite consensus disorder prediction 1 34 - -
Mepo1g00020 430 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 46 312 - -
Mepo1g00020 430 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
Mepo1g00020 430 MobiDBLite consensus disorder prediction 210 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g00020 Mepo-Chr1 196618 199127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g00020 1 231 NAC Transcription Factor Family AT2G02450 71.064 1.78e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g00020 NAM 4.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g00020 - - tpra:123910806 587.415