Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo18g00005 ATGTCGACCCCTTTTTTCTACCTTATGGCTGCCACTGACGACAACAACAACAAACCCAAGGATTATTACAAAGTGCTGGAGATTGAATATGATGCAACAGATGAAGATATCAGATTAAATTACCGAAGACTCGCCCTGAAATGGCATCCCGACAAACACAAAGATGACAGTGCTGTTACTGCAAAATTTCAAGAGATAAATGAAGCTTACAATGTATTGAGCGATCCTGCCAAGCGTTTAGACTATGATTTAACTGGGGCATGTGAGATCGAGAAGTATAGCTTGCAGGAATATCTTGCCAGATTTAAAGGAATGATTCTTACCTGCAATGGACTTGGTATCAACAATGAAGACAGATGGCCACAACAATTGATTGAAGATTTTGAACCACTAGATAAATAA 402 0.3905 MSTPFFYLMAATDDNNNKPKDYYKVLEIEYDATDEDIRLNYRRLALKWHPDKHKDDSAVTAKFQEINEAYNVLSDPAKRLDYDLTGACEIEKYSLQEYLARFKGMILTCNGLGINNEDRWPQQLIEDFEPLDK 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo18g00005 133 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Mepo18g00005 133 SMART dnaj_3 20 78 IPR001623 -
Mepo18g00005 133 Gene3D DnaJ domain 8 100 IPR036869 -
Mepo18g00005 133 FunFam Chaperone protein DNAj, putative 13 100 - -
Mepo18g00005 133 ProSiteProfiles dnaJ domain profile. 21 86 IPR001623 -
Mepo18g00005 133 SUPERFAMILY Chaperone J-domain 18 105 IPR036869 -
Mepo18g00005 133 CDD DnaJ 21 75 IPR001623 -
Mepo18g00005 133 PRINTS DnaJ domain signature 23 41 IPR001623 -
Mepo18g00005 133 PRINTS DnaJ domain signature 41 56 IPR001623 -
Mepo18g00005 133 PRINTS DnaJ domain signature 58 78 IPR001623 -
Mepo18g00005 133 PRINTS DnaJ domain signature 78 97 IPR001623 -
Mepo18g00005 133 Pfam DnaJ domain 21 83 IPR001623 -
Mepo18g00005 133 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 13 117 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo18g00005 22 83 C2H2 Transcription Factor Family AT1G74250 46.269 1.81e-11 58.5