Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo17g00003 ATGGCATCGATATCCTCATCTTGCTTTACATATGGATGGAAATATGATGTCTTTCTAAGCTTCACAGGCCAAGATACTAGACACGGTTTTACTGGTTATTTGTACAAAGCACTGACTGATAGGGGAATTCACACCTTCATTGATGACGAAGAACTTCAACGAGGGGAACAGATTATGCCATCACTTGTCAAGGAAATTGCAGAGACCAGAATTGCTATTCTTGTGTTCTCTAAGAAGTATGCTTTTTCATCATTCTGTTTAGACGAACTTGTTCACGTCCTTGACTTAATTAAGGAGAAGGGCCGGTTAGTTTTGCCCGTTTTTTATGACGTGGATCCTTCTGATGTGCGACATCAGAGAGGTAGTTATAAAGAAGCACTAGCTAAACATGAGGAAAGATTTCAAAATGATAAGGAGAAGGTGCAAAAGTGGCGGATAGCTTTGAGTCAAGCAGCTGATTTGTCTGGCTATCATTTCAAACATGGGAATGAGAATGAATATGAGTTTATAGAGAAGATCATTAAAGGGATCTCACACATTATTAATCGCATTCCTTTGCATATTGCGGATTATCCTGTTGGATTGGAGTCTCGAGTGCTAAAAGTAACCTCACTTTTAAATGTTGGATCAGATGGAGTCCTGATGGTAGGAATCCACGGTATTGGTGGAATTGGTAAAACCACAATTGCTCGAGCTGTATATAATTTGATTGCTGATCAATTTGAAGGTTGGTGTTTTCTTGATGATGTAAGGGAAAATTCAATCAAACACGGACTAGTGCATCTCCAAGAGACAGTTCTTGATGATATTATTGGAAAGAACTATACGAAGATAGGAAGTGTCAATAAAGGAATTCCAATAATAAAACATAGGCTTCACCGAAAGAAGGTTCTTTTGGTTCTTGATGATGTCGATAAACTAGAGCAGTTGAGGGCCATAGTTGGAGAGTCTGGTTGGTTTGGTCCCGGCAGCAGAGTAATCATTACAACTCGGGACAGGCATTTGTTAACAAGCCACGGGGTTGAAAAATCGTATGAGCTAGATGGGTTGAATACGAAAGAAGCACTTGAATTAATTTGTTGGAATGCTTTTAAAACTGACAAAGCTGATTCAAGTTACGAGAACATTTTAAGTCGTGCAGTAAGTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATGGGTTCCTACTTGATCGGAAAAAGTATACAAGAATGGAAATCATCAATAGATCAGTTTGAAAGAATTCCCGATAAAAATATCCACGACATACTTAACGTAAGTTTTGTTTGTTTGGATGAACATCAGCAGAAGATATTTCTTGACATTGCCTGTTGCTTCAGAGGATGTGATTTGTCATACATCAGAAATATACTTCAGATTCATTATGGTTTCTGCCCTGAATATGGTATTGGTGTCCTGATAGAAAAATCTCTCATAAAGATAACTTTGAAAGGTCATGTAATAATGCACGACTTGATAGTGGACATGGGCAAAGAGATTGTTCGGCAAGAATCACCGGAGGAGCCTGGAAAACATAGCAGGTTATGGTTTCCTGAAGATATAGTTCATGTTTTCGAAGAAAATACTGGAACTAGCAGTATTCAAGTCATAATTCTGGATTTCCCCGAGTTTGAAGAAGTGGTAGAATGGGATGGAATGGCATTCAAGGAAATGAAAAACCTCAAAACTCTTATTATTAGAGTTGGTAGTTTTTCCAAAGGTCCCGAGTATCTTCCAAATAGTTTAAGAGTATTGGAATGGTCGGGATATCCATCACCATCTTTACCTCCCAACTTTCATCCAAAGAAACTTGTGATACTGAAGTTACGACAAAGTTACTTAATGTCACTCGACTTTCTTATATCAAAGAAGGTAAGGATAGTAAGTTCTTTTCTCCTGTCTAAAATATCAACGAATCCATTTGAATTTTGGCAGAAGTTCGTGAGCATGAGAGTTTTGAATTTTGATGATGTTCAGTGTATAGCTGAGATACCTGATGTGTCTGGTGCTCCAAATTTAGAAGAATTATCATTTGGAGATTGCACAAATTTAATTAAGATTCATGAATCAGTTGGATTCTTGAATAAACTTAAAATGTTGAATGCTGATGGAAGTAGCCGGCTTGGAACTTTTCCACCTATCAAGTTGAGCTCTCTCGAAAGACTCAAACTTTCATCTTGTCACTGTCTGAATAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATAAAAGTCATTGATTTAATGGACACTCCAATAAAACAACTTCCATTTACAAATCACAATCTCAACCGGCTTGAAAGAGCAGTACTGATTGGTTGTGGTGTTGTTCAGTTACCAAGTAGTATTTTTATGATGCCGGAACTTCATGAGTTGATTGCTGGGGAGTGTACATTGTTATTGCCAAAATCAGTCGATTTTGAAGCCCAATCGAGCTCAATGGTCCTAAATTTAGGTCTTTCAGGTTGCAACGTATCAGATGATTTCCTTCGAATTGGTTTGCCTTTGTTTTCAAATGTGAAAGAGTTGTATCTATCGCAAAATAAATTTACAACTCTTCCTGCATGTGTCAAAGAATGTTACTTTCTAACCAAAATTCATTTGGATGGTTGCAAGCATCTCAAAAGAATCCGTGGGGTTCCACCAAACATGGAAATATTATCTGCAAAATGGTGCACGTCCTTGATAGTTTTAGACCTCAAACTTCTTCCTAAATGCGTCGAAAAACTGCATGCGGAGGGCGGTAACAAGGAGTTTCACTTACCAGGAAGTCATATTCCAATGTGGTTTGAGCACGTCTATGATCATGATGCATCAATTACTTTCTGGTTTCGTAAAAAGATCCCCGCAATATCTCTATGTCTTGTTGTTCGACCAGGCACATTTGAAGAAATTATTCAGCCCAGATTTATCATCAATGGGAAAAGAAAAACATGTGCATTTGAGCTAAATCTCAATGACAATGATCATTTTGATGCAGCTCTTTGTTTTCCATTTGTTCTCAAAAGCCTCTCTTCTGGATGCAGTCTTCATCTTTGA 3042 0.378 MASISSSCFTYGWKYDVFLSFTGQDTRHGFTGYLYKALTDRGIHTFIDDEELQRGEQIMPSLVKEIAETRIAILVFSKKYAFSSFCLDELVHVLDLIKEKGRLVLPVFYDVDPSDVRHQRGSYKEALAKHEERFQNDKEKVQKWRIALSQAADLSGYHFKHGNENEYEFIEKIIKGISHIINRIPLHIADYPVGLESRVLKVTSLLNVGSDGVLMVGIHGIGGIGKTTIARAVYNLIADQFEGWCFLDDVRENSIKHGLVHLQETVLDDIIGKNYTKIGSVNKGIPIIKHRLHRKKVLLVLDDVDKLEQLRAIVGESGWFGPGSRVIITTRDRHLLTSHGVEKSYELDGLNTKEALELICWNAFKTDKADSSYENILSRAVSYASGLPLALEVMGSYLIGKSIQEWKSSIDQFERIPDKNIHDILNVSFVCLDEHQQKIFLDIACCFRGCDLSYIRNILQIHYGFCPEYGIGVLIEKSLIKITLKGHVIMHDLIVDMGKEIVRQESPEEPGKHSRLWFPEDIVHVFEENTGTSSIQVIILDFPEFEEVVEWDGMAFKEMKNLKTLIIRVGSFSKGPEYLPNSLRVLEWSGYPSPSLPPNFHPKKLVILKLRQSYLMSLDFLISKKVRIVSSFLLSKISTNPFEFWQKFVSMRVLNFDDVQCIAEIPDVSGAPNLEELSFGDCTNLIKIHESVGFLNKLKMLNADGSSRLGTFPPIKLSSLERLKLSSCHCLNSFPEILGKMENIKVIDLMDTPIKQLPFTNHNLNRLERAVLIGCGVVQLPSSIFMMPELHELIAGECTLLLPKSVDFEAQSSSMVLNLGLSGCNVSDDFLRIGLPLFSNVKELYLSQNKFTTLPACVKECYFLTKIHLDGCKHLKRIRGVPPNMEILSAKWCTSLIVLDLKLLPKCVEKLHAEGGNKEFHLPGSHIPMWFEHVYDHDASITFWFRKKIPAISLCLVVRPGTFEEIIQPRFIINGKRKTCAFELNLNDNDHFDAALCFPFVLKSLSSGCSLHL 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo17g00003 1013 Gene3D - 349 433 IPR042197 -
Mepo17g00003 1013 SUPERFAMILY L domain-like 549 923 - -
Mepo17g00003 1013 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 157 IPR035897 -
Mepo17g00003 1013 Pfam TIR domain 14 178 IPR000157 GO:0007165
Mepo17g00003 1013 SMART till_3 14 154 IPR000157 GO:0007165
Mepo17g00003 1013 Gene3D - 11 180 IPR035897 -
Mepo17g00003 1013 Gene3D - 181 343 IPR027417 -
Mepo17g00003 1013 Pfam NB-ARC domain 202 417 IPR002182 GO:0043531
Mepo17g00003 1013 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Mepo17g00003 1013 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Mepo17g00003 1013 Gene3D Ribonuclease Inhibitor 524 733 IPR032675 -
Mepo17g00003 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 736 IPR044974 GO:0006952
Mepo17g00003 1013 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Mepo17g00003 1013 Gene3D Ribonuclease Inhibitor 734 918 IPR032675 -
Mepo17g00003 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Mepo17g00003 1013 PRINTS Disease resistance protein signature 384 398 - -
Mepo17g00003 1013 PRINTS Disease resistance protein signature 715 731 - -
Mepo17g00003 1013 PRINTS Disease resistance protein signature 291 305 - -
Mepo17g00003 1013 PRINTS Disease resistance protein signature 215 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo17g00003 9 801 WRKY Transcription Factor Family AT4G12020 30.112 1.09e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo17g00003 - - gmx:121173697 1101.27