Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo176g00002 ATGGCAGCAGCAGGGCAACTGAACGTGATTGATTCACCTTCGCGTGGTTCCCGCAGCGTCGATTGCTTCGAGAAGCTCGAACAAATCGGTGAAGGCACCTATGGTCAAGTTTACATGGCTAAAGAGATCGAAACCGGCGAAATTGTTGCTCTCAAGAAAATACGTATGGATAATGAAAGAGAAGGGTTTCCTATTACTGCTATACGCGAAATCAAAATTCTAAAAAAACTACACCATGAAAATGTTATCAAGTTAAAGGAAATCGTTACGTCCCCAGGCCCTGAGAAAGATGATCAAGGAAGGCCAGATGGAAACAAATATAAGGGGGGCATATATATGGTTTTCGATTATATGGATCATGATTTAACAGGTCTTGCGGACCGACCTGGGATGAGATTTACTGTCCCCCAGATTAAGTGTTACATGAGGCAGCTTTTGACAGGACTGCACTATTGTCATGTCAATCAAGTTCTTCACCGTGATATTAAAGGCTCAAATCTTCTCATAGATAATGAAGGTAACCTGAAGCTGGCAGATTTTGGGCTGGCAAGGTCATTTTCGAATGAGCATAATGCAAACCTTACAAATCGAGTCATCACATTATGGTACAGACCCCCTGAGTTACTACTGGGTACAACAAGATATGGGCCAGCTGTAGACATGTGGTCCGTGGGGTGCATTTTTGCCGAGCTTCTTCACGGGAAACCCATCTTTCCTGGAAAAGACGAGCCGGAGCAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCAGACGAGGTGAACTGGCCTGGAGTTCAAAAGACTCCTTGGTACAATCAGTTTAAGCCAACAAGACCAATGAAAAGGCGTCTGAGGGAAGTTTTCAGACATTTTGATCGCCATGCATTGGAGTTGTTGGAGAAGATGCTCACACTTGATCCTGCTCAGAGAATTTCTGCCAAGGACGCACTTGATGCTGAGTACTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTATGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGTCAGCAGCAAAGGCAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCGCAACAGCATACTCGTCTTCCCCCGATTCAGCAGGGTGGACATCATGCCCAAATGCGGCAAGGTCCTAGCCACCCTAGTCATGGATCTCAACCAGCAGTCGCTGCAGGACCTAGCCATCATTATGGTAAGCCTCGTCCCTCTGGTGGGCCAGGAAGATATCCTCCTGGTGGGAACCCTAGTGGGGGTTACAATCATCCAAATCGTGGAGGTCAAGGAGGGGGTGCTGGTTACGGTAGTGGGCCATATCCTCCTCAAGGGCGTGGGGCACCTTATGGGTCTGGTGGTATGCCTGCAGGACCCGGTGGTGGTCCTCGCGGTGGAGGTGGCAGTGGCTATGGGGTTGGAGGTCCAAATTATCCTCAAGGTGGTCCTCCGCATGGTGGATCGGCTGCTGGCCGTGGGTCAAACATGATGGGTGGGAATCGCAACCAACAGTATGGTTGGCAGCAGTAG 1554 0.4807 MAAAGQLNVIDSPSRGSRSVDCFEKLEQIGEGTYGQVYMAKEIETGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDDQGRPDGNKYKGGIYMVFDYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVQKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHTRLPPIQQGGHHAQMRQGPSHPSHGSQPAVAAGPSHHYGKPRPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSGGMPAGPGGGPRGGGGSGYGVGGPNYPQGGPPHGGSAAGRGSNMMGGNRNQQYGWQQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo176g00002 517 ProSiteProfiles Protein kinase domain profile. 23 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo176g00002 517 PANTHER CELL DIVISION PROTEIN KINASE 21 328 - -
Mepo176g00002 517 SMART serkin_6 23 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo176g00002 517 Gene3D Phosphorylase Kinase; domain 1 11 119 - -
Mepo176g00002 517 CDD STKc_CDK9_like 23 322 - -
Mepo176g00002 517 FunFam Cyclin-dependent kinase C-2 120 362 - -
Mepo176g00002 517 MobiDBLite consensus disorder prediction 333 517 - -
Mepo176g00002 517 SUPERFAMILY Protein kinase-like (PK-like) 18 330 IPR011009 -
Mepo176g00002 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Mepo176g00002 517 MobiDBLite consensus disorder prediction 335 364 - -
Mepo176g00002 517 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mepo176g00002 517 Pfam Protein kinase domain 23 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo176g00002 517 Gene3D Transferase(Phosphotransferase) domain 1 120 362 - -
Mepo176g00002 517 MobiDBLite consensus disorder prediction 503 517 - -
Mepo176g00002 517 FunFam Cyclin-dependent kinase C-2 10 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo176g00002 1 517 Core Cell Cycle Gene Families AT5G10270 78.011 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo176g00002 Pkinase 1.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo176g00002 K08819 - gmx:100793565 869.766