Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo16g00051 ATGGGAGAAACAATACACGACCAGCACACAGGAACAGCAGCAGCAGCAGCAACAGCTACAACGACAAAAACAGCAGCAACAACCTCGTCCAAGAGAATCAGCGGCAGCGGAGGAGGAGAAATCGTGGAGGTACAAGGAGGTCACATTGTCCGTTCAACAGGACGCAAAGACCGTCACAGTAAAGTTTGCACCGCGAAAGGTCCCCGTGACCGCCGCGTACGACTCTCAGCCCACACTGCGATTCAATTCTACGACGTGCAAGATCGTCTCGGCTACGACAGGCCAAGTAAAGCAGTCGATTGGCTCATTAAAAAAGCCAAATCTGCTATCGACGAACTCGCTCACCTCCCCGCTTGGAACCCCACAGCTACATGTTCTTCAACACCACAGCAGCAGCAGCAGCAAACAAATGAAATGTTTCACCGGCAATCTCCGGTGGACAACAATCCAGTAACCGCTTCTACCAGTCACCGCTCAGCGGCATTAGAGCGAAGAATGCCACCACAAGAACAACAATTTCCTTCCCAACAACAACAGTTGGAGTTAGACTACAACAGTAGTAGCAGTGGGAAACATGGTTATCTTCAAGGCTCGTTAGACACTGACATTGCTGATACTATTAAGTCTTTTTTTCCAGTTGAAACGCCCACAACGTCGTTTCACAGTTATCAACAACCGCCGGATTTACTCTCTCGAACGGCGGCAACCACCCAGCAGCAAGATCTCCGCCTCTCATTGCAATCTTTTCAAGATCCTATTATGCTTCAGAGCCACCATGACAACCACCACCACAACAACAACCACCAAGTGCTTTTCGCCGGAAACTCCTCCCTTGGTTACGACGGTGGTGGAAGTGCAAGCACCTTGTGGTCCGAGCAGCAGCAGCAGCAGCAAGAGGAGCATGATAACGGCAGATTGCATAGAATGATGGCTTGGAATGCTAATAATGTTAATGTTAATGCTGCAGATGGTGGTAACAGTGGCCATGGTGCTGGATTTGTGTTCAGTACACCGGCGCCGGCGTTTGGCAGTTATGGTCAGTTTATTACTCAGAGGGGACCCCTTCAGTCCAGTTACAATCCTTCAGTTCGTGCTTGGATAGATCCTTCAATGGCGACGGCGAATATCGCTGATCACCATCATCACTATCTTTCGCCGATGATCCATCAGGCTTCTGTCTCTGGTGGTGTATTCTCAGGCTTTCGTATACCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTATCCGATAAACCGTCCTCTGCTTCCTCCGACTCTCGTCATTGA 1290 0.5 MGETIHDQHTGTAAAAATATTTKTAATTSSKRISGSGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAHLPAWNPTATCSSTPQQQQQQTNEMFHRQSPVDNNPVTASTSHRSAALERRMPPQEQQFPSQQQQLELDYNSSSSGKHGYLQGSLDTDIADTIKSFFPVETPTTSFHSYQQPPDLLSRTAATTQQQDLRLSLQSFQDPIMLQSHHDNHHHNNNHQVLFAGNSSLGYDGGGSASTLWSEQQQQQQEEHDNGRLHRMMAWNANNVNVNAADGGNSGHGAGFVFSTPAPAFGSYGQFITQRGPLQSSYNPSVRAWIDPSMATANIADHHHHYLSPMIHQASVSGGVFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo16g00051 429 MobiDBLite consensus disorder prediction 124 159 - -
Mepo16g00051 429 Pfam TCP family transcription factor 54 171 IPR017887 -
Mepo16g00051 429 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Mepo16g00051 429 MobiDBLite consensus disorder prediction 1 61 - -
Mepo16g00051 429 MobiDBLite consensus disorder prediction 408 429 - -
Mepo16g00051 429 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 357 IPR005333 GO:0003700
Mepo16g00051 429 MobiDBLite consensus disorder prediction 11 35 - -
Mepo16g00051 429 MobiDBLite consensus disorder prediction 124 196 - -
Mepo16g00051 429 MobiDBLite consensus disorder prediction 169 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo16g00051 35 429 TCP Transcription Factor Family AT1G53230 46.763 2.10e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mepo16g00051 TCP 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo16g00051 - - mtr:25502512 710.679