Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo16g00033 ATGGAGGAGCTTTCCAATGTGAAATCTGAACTAAGTCCAAGAAGTCATAGATTGCTCATGCTGGATGCTGATTCTGTTGTTACTACTAAATCCGTCAAAAGGCGGCGAAGAGACTCATCGGTGTTAGGTGGCAATGAACAACAAGGCGATGTATCAGAAATACAGAAGCCACTGAGTGGTCAATCCACTGCAACCACTGTGAAGAGAAGCTCGAGGCATAGGTGGACTGGAAGGTATGAAGCTCATTTATGGGATAAAGGGACATGGAATCCTACTCAAAAGAAAAAAGGAAAGCAAGGTGCTTATAACGATGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTCAAATACTGGGGAACGTCGACGTTTACAAATTTTCCTGTGCCTGACTATGAGAAAGAAATTGAGATAATGATAAATATGACCAAAGAAGAGTATCTTGCTTCATTGAGAAGGAGGAGTAGTGGCTTTTCAAGAGGTGTATCAAAATATAGAGGAGTAGCAAGGCACCATCACAATGGAAGATGGGAAGCAAGGATCGGAAGAGTGTTTGGCAACAAGTACCTCTACCTCGGGACTTACGGTACACAAGAAGAGGCGGCTCGCGCATACGATATCGCAGCAATTGAATACCGAGGCATAAATGCAGTTACAAACTTTGACTTGAGCACCTACATAAGATGGTTAAGGCCCGGACCTAATCCCACAACTTCTCAAGAACAAAAATCAAACACTGAACCTCAAACCTTTGCAGCCACAAATTTTATTCAAACAAGAGGAAACCAGGATGCATCAAACTCTAAAATAAATCCAAAAAAGCTTTTGCAAGTTGAAAATACGAAGAAGCAACTGTCTTTCAACTCTTTGATGACCCCTATAAGTCCTTGCAGCAAACCAGATTCACCAACAGCATTAGGACTTCTACTAAAATCCTCAATGTTTAGAGAACTAATGCAGAGAAATCTAAATTCATCTAATGAAGACGAAGAAGTTGAATTGAAATACCCTCAAGAGGGGATTGCAGGGGTTTTTGACATTGACAACAACAGTAACACTTACTTGTGCTCTTCTAATATAAGCAGATTACCTAACTTGGTATCATCAGAAGAGAGGCCATTGCCTATGTATCATGGAACTATGCAATCCCTATGGAATGGCCCTTCCAACATTTCTAACTGA 1185 0.4118 MEELSNVKSELSPRSHRLLMLDADSVVTTKSVKRRRRDSSVLGGNEQQGDVSEIQKPLSGQSTATTVKRSSRHRWTGRYEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAALKYWGTSTFTNFPVPDYEKEIEIMINMTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGPNPTTSQEQKSNTEPQTFAATNFIQTRGNQDASNSKINPKKLLQVENTKKQLSFNSLMTPISPCSKPDSPTALGLLLKSSMFRELMQRNLNSSNEDEEVELKYPQEGIAGVFDIDNNSNTYLCSSNISRLPNLVSSEERPLPMYHGTMQSLWNGPSNISN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo16g00033 394 FunFam AP2-like ethylene-responsive transcription factor 164 225 - -
Mepo16g00033 394 CDD AP2 164 225 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 SUPERFAMILY DNA-binding domain 164 225 IPR016177 GO:0003677
Mepo16g00033 394 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
Mepo16g00033 394 Gene3D AP2/ERF domain 67 130 IPR036955 GO:0003700|GO:0006355
Mepo16g00033 394 Gene3D AP2/ERF domain 164 225 IPR036955 GO:0003700|GO:0006355
Mepo16g00033 394 MobiDBLite consensus disorder prediction 42 70 - -
Mepo16g00033 394 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 286 - -
Mepo16g00033 394 Pfam AP2 domain 164 215 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 ProSiteProfiles AP2/ERF domain profile. 165 223 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 SMART rav1_2 72 135 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 SMART rav1_2 165 229 IPR001471 GO:0003700|GO:0006355
Mepo16g00033 394 MobiDBLite consensus disorder prediction 29 72 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo16g00033 65 245 AP2-EREBP Transcription Factor Family AT5G57390 59.694 5.30e-76 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo16g00033 AP2 4.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo16g00033 - - gmx:100798483 589.726