Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo16g00011 ATGGATACGAAGAAGGAGAAGCAACAAGGGAATGAAGAATCGTCTACGAAGAAGGAGCGGCATATTGTGACTTGGACTCAAGAGGAGGATGATATACTAAGAGAACAGATTGGAAATCATGGAACTGAAAATTGGGCAACTATTGCATCCAAATTCAAGGACAAAACTACAAGACAATGTAGAAGAAGATGGTACACTTATTTGAATGCCAATTTCAAGAAAGGTGGATGGACACCAGACGAAGATATCCTCTTATGTGAGGCTCAGAAAGTATTTGGAAACAGATGGACAGAAATAGCAAAGGTGGTTTCGGGAAGAACGGATAATGCTGTAAAAAATCGTTTCTCCACACTCCGCAAGAAGAGGGGGAAAAATGACATTGATTCAAATAGCAAGAGGAATATTTCCTCTCAAGGTTATAATACAGATGCAATGTCAGAATCTGCCATGCCAGTTAAAAAAACGAGGACGGCCCATATCCTCGATGATGCTAAAAAGATCAACATTGGAGACAGATCACATTTGCGAAATGCAATTTCAATAAATCAGCAGCCAAGAGCACCACTTGCCGAATTAGCTCAACAATCCAATAATGTGAACAATTTTCCAGACAGGCATCATGTTTCCAATGACAAGACCAACAGTTCAGGCCAAAATAACAAATATGAACTCAAAAAGGATGATCCGAAGATAAGTGCATTGATTCAAATAATTGATTCAGAGAACATGGAAAGAGTATGGAAGCCACTTCTAGAGTTTCTGAACCAAACAGATATCATTGGAGAAAAAATTGCAGTTTTACAGCTTGTAAGCCATACTGTCAAGGAGTTTAAGAGTAGTAATGAGAGAGGCCATTCCCGCTTGAGGCAAATAAAACCAGACAAAAACTCCCCAGGAAGTTCTGAATACAGTACAGGATTAACTCTGCAGCAAAAGTCAACTTGTACTGGTGATAATTTGGAAAGCGCATTGAATCAGGATACTGGAACTGAAATTCAAGCTGCACAATTTGTGGTTAAAAAAGAAGTATGTGAAGGTGTGAAAGAGGTTCTTTCTACTGGAAAAGTGGAAGAAGATATGATACCAAACTGTGATGAACAGATAATTACCTCGCCAAGAATGGAGTGTTCCCCTCTTCAAGTGACTCCTATTTTCAGATCCTTCGCTGAAGGAATTCCAACCCCAGAATTTACAGACAGTGAAAAGAGCTTCCTAAGGAAAACACTGGGAGTGGAGTCTCCATCTATCAGTACCAATGTCAACCCATACAAACCGCCACCGTGCGTAAGAGCCCTTCAATATAATCCGTGA 1311 0.3997 MDTKKEKQQGNEESSTKKERHIVTWTQEEDDILREQIGNHGTENWATIASKFKDKTTRQCRRRWYTYLNANFKKGGWTPDEDILLCEAQKVFGNRWTEIAKVVSGRTDNAVKNRFSTLRKKRGKNDIDSNSKRNISSQGYNTDAMSESAMPVKKTRTAHILDDAKKINIGDRSHLRNAISINQQPRAPLAELAQQSNNVNNFPDRHHVSNDKTNSSGQNNKYELKKDDPKISALIQIIDSENMERVWKPLLEFLNQTDIIGEKIAVLQLVSHTVKEFKSSNERGHSRLRQIKPDKNSPGSSEYSTGLTLQQKSTCTGDNLESALNQDTGTEIQAAQFVVKKEVCEGVKEVLSTGKVEEDMIPNCDEQIITSPRMECSPLQVTPIFRSFAEGIPTPEFTDSEKSFLRKTLGVESPSISTNVNPYKPPPCVRALQYNP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo16g00011 436 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Mepo16g00011 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 123 IPR017930 -
Mepo16g00011 436 MobiDBLite consensus disorder prediction 1 20 - -
Mepo16g00011 436 MobiDBLite consensus disorder prediction 279 306 - -
Mepo16g00011 436 CDD SANT 77 118 IPR001005 -
Mepo16g00011 436 Gene3D - 14 73 - -
Mepo16g00011 436 FunFam Transcription factor MYB124 17 73 - -
Mepo16g00011 436 SMART sant 73 121 IPR001005 -
Mepo16g00011 436 SMART sant 21 70 IPR001005 -
Mepo16g00011 436 PANTHER MYB PROTEIN-RELATED 24 193 - -
Mepo16g00011 436 Gene3D - 75 145 - -
Mepo16g00011 436 MobiDBLite consensus disorder prediction 130 145 - -
Mepo16g00011 436 SUPERFAMILY Homeodomain-like 21 115 IPR009057 -
Mepo16g00011 436 CDD SANT 24 68 IPR001005 -
Mepo16g00011 436 Pfam Myb-like DNA-binding domain 25 85 - -
Mepo16g00011 436 ProSiteProfiles Myb-like domain profile. 25 68 IPR001005 -
Mepo16g00011 436 MobiDBLite consensus disorder prediction 121 151 - -
Mepo16g00011 436 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 72 IPR017930 -
Mepo16g00011 436 MobiDBLite consensus disorder prediction 199 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo16g00011 63 435 MYB Transcription Factor Family AT1G14350 41.895 8.94e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo16g00011 Myb_DNA-bind_6 5.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo16g00011 K09422 - gmx:100807667 462.611