Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo154g00008 ATGGTTTTCGATTATATGGATCATGATTTAACAGGTCTTGCGGACCGACCTGGGATGAGATTTACTGTCCCCCAGATTAAGTGTTACATGAGGCAGCTTTTGACAGGACTGCACTATTGTCATGTCAATCAAGTTCTTCACCGTGATATTAAAGGCTCAAATCTTCTCATAGATAATGAAGGTAACCTGAAGCTGGCAGATTTTGGGCTGGCAAGGTCATTTTCGAATGAGCATAATGCAAACCTTACAAATCGAGTCATCACATTATGGTACAGACCCCCTGAGTTACTACTGGGTACAACAAGATATGGGCCAGCTGTAGACATGTGGTCCGTGGGGTGCATTTTTGCCGAGCTTCTTCACGGGAAACCCATCTTTCCTGGAAAAGACGAGCCGGAGCAATTAAATAAGATTTTTGAGCTGTGTGGAGCACCAGACGAGGTGAACTGGCCTGGAGTTCAAAAGACTCCTTGGTACAATCAGTTTAAGCCAACAAGACCAATGAAAAGGCGTCTGAGGGAAGTTTTCAGACATTTTGATCGCCATGCATTGGAGTTGTTGGAGAAGATGCTCACACTTGATCCTGCTCAGAGAATTTCTGCCAAGGACGCACTTGATGCTGAGTACTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTACCCAAGTATGAGTCATCACATGAGTTTCAGACCAAGAAAAAGCGTCAGCAGCAAAGGCAAAATGAAGAAAATGCCAAGCGTCTTAAAATGCAGCATCCGCAACAGCATACTCGTCTTCCCCCGATTCAGCAGGGTGGACATCATGCCCAAATGCGGCAAGGTCCTAGCCACCCTAGTCATGGATCTCAACCAGCAGTCGCTGCAGGACCTAGCCATCATTATGGTAAGCCTCGTCCCTCTGGTGGGCCAGGAAGATATCCTCCTGGTGGGAACCCTAGTGGGGGTTACAATCATCCAAATCGTGGAGGTCAAGGAGGGGGTGCTGGTTACGGTAGTGGGCCATATCCTCCTCAAGGGCGTGGGGCACCTTATGGGTCTGGTGGTATGCCTGCAGGACCCGGTGGTGGTCCTCGCGGTGGAGGTGGCAGTGGCTATGGGGTTGGAGGTCCAAATTATCCTCAAGGTGGTCCTCCGCATGGTGGATCGGCTGCTGGCCGTGGGTCAAACATGATGGGTGGGAATCGCAACCAACAGTATGGTTGGCAGCAGTAG 1218 0.4943 MVFDYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHNANLTNRVITLWYRPPELLLGTTRYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVQKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEENAKRLKMQHPQQHTRLPPIQQGGHHAQMRQGPSHPSHGSQPAVAAGPSHHYGKPRPSGGPGRYPPGGNPSGGYNHPNRGGQGGGAGYGSGPYPPQGRGAPYGSGGMPAGPGGGPRGGGGSGYGVGGPNYPQGGPPHGGSAAGRGSNMMGGNRNQQYGWQQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo154g00008 405 MobiDBLite consensus disorder prediction 223 252 - -
Mepo154g00008 405 Pfam Protein kinase domain 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo154g00008 405 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo154g00008 405 MobiDBLite consensus disorder prediction 221 405 - -
Mepo154g00008 405 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
Mepo154g00008 405 CDD STKc_CDK9_like 1 210 - -
Mepo154g00008 405 PANTHER CELL DIVISION PROTEIN KINASE 1 216 - -
Mepo154g00008 405 SMART serkin_6 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo154g00008 405 MobiDBLite consensus disorder prediction 391 405 - -
Mepo154g00008 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Mepo154g00008 405 FunFam Cyclin-dependent kinase C-2 8 250 - -
Mepo154g00008 405 Gene3D Transferase(Phosphotransferase) domain 1 8 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo154g00008 1 405 Core Cell Cycle Gene Families AT5G10270 75.854 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo154g00008 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo154g00008 K08819 - gmx:100793565 662.914