LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo154g00007	ATGGGAAGTTCTTGTACAAAACCTGTTGCTCATGTCTCTTCATCAAACATTTCTGGAAGTAAGAAGCCTCAAAGCACGAGCACCGCAAAGCGGTATTCAAATTCATCTGAACAGAGAGCTTCTTCCCAAAGTTCACAAGAAAAGCGGTATTCAAATTCATCTGAACAAAGAGCTTTTTCCCAAAGTTCACAAGAAAAGCGGTATTCAAATTCATCTGAACAAAGAGCTTCTTCCCAAAGTTCACAAGAAAAGCGGTATTCAAATTCATCTGAACAAAGAGTTTCTTTCCAAAGTTCACAAGAAAATGTGGAAACTTCAATCTCCAACAAACTTAAGTCCTTCAGCTTGAATGATCTGAAGGAGGCTACTAAGAATTTCCGGCGAGAATATTTAATTGGAGAGGGAGGGTTCGGGCGTATCTTCAAGGGATGGATTGATGAGAACACATATGCTCCCACAAAACCAGGGAGTGGAATTGTAGTGGCCATCAAGAATCTTAAGCAAGAGAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTAAATTATCTAGGTCAGCTTCACCATGAAAATCTGGTGAAACTCATCGGTTACTGCTTGCAAGGAAAAAACAGGCTTCTAGTATACGAGTTCATGCAAAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAAACGTTCAGCCTATTGCCTGGGCAACTCGTGTCAATATTGCTGTTGGTGTTGCAAAAGGATTAGCATTCTTACATTCTTTGAATGCCAATGTTATCTTTCGTGATTTAAAGGCCTCCAATATCCTACTTGATTCAGATTTCAATGCAAGGCTTTCGGATTTCGGGTTGGCAAGAGATGGTCCTACTGGGGATAATACTCACGTTTCAACTAGAATCATTGGAACTCAAGGTTATGCTGCTCCAGAATATGTGGCTACAGGTCATTTGACACCGAGGAGTGATGTATACAGCTTTGGCGTTGTCTTGTTAGAGTTACTAACAGGAAAGCGTGCAGTAGAAGACGCGAGACCTGGATTTTCTGAAGAAACTCTTGTGGATTGGGCAATGCCTTTCTTGAGTGATAACAGAAGAGTTTTGAGAATCATGGACACGAGATTAGGTGGTCAATACTCAAAGAAAGGTGCACAAGCTGCAGCTGCACTAGCATTGCAATGCTTAAACTCAGATCCTAAATTTAGACCACCTATGGTAGATGTTCTTGCAACATTGGAAGGACTTCAATCATCAAATGCAATCCAAAGGACACCAAAATATGGAAATGAGAGTCCTGCAACCAAACATTCTTCTCATTCCCTAAGGTAA	1314	0.4072	MGSSCTKPVAHVSSSNISGSKKPQSTSTAKRYSNSSEQRASSQSSQEKRYSNSSEQRAFSQSSQEKRYSNSSEQRASSQSSQEKRYSNSSEQRVSFQSSQENVETSISNKLKSFSLNDLKEATKNFRREYLIGEGGFGRIFKGWIDENTYAPTKPGSGIVVAIKNLKQESFQGHKEWLAEVNYLGQLHHENLVKLIGYCLQGKNRLLVYEFMQKGSLENHLFRKNVQPIAWATRVNIAVGVAKGLAFLHSLNANVIFRDLKASNILLDSDFNARLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGKRAVEDARPGFSEETLVDWAMPFLSDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLNSDPKFRPPMVDVLATLEGLQSSNAIQRTPKYGNESPATKHSSHSLR	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo154g00007	437	SUPERFAMILY	Protein kinase-like (PK-like)	100	413	IPR011009	-
	Mepo154g00007	437	SMART	serkin_6	126	405	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo154g00007	437	MobiDBLite	consensus disorder prediction	1	101	-	-
	Mepo154g00007	437	FunFam	Serine/threonine-protein kinase BIK1	93	211	-	-
	Mepo154g00007	437	CDD	STKc_IRAK	132	410	-	-
	Mepo154g00007	437	ProSiteProfiles	Protein kinase domain profile.	126	410	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo154g00007	437	MobiDBLite	consensus disorder prediction	415	437	-	-
	Mepo154g00007	437	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	212	421	-	-
	Mepo154g00007	437	Gene3D	Transferase(Phosphotransferase) domain 1	212	430	-	-
	Mepo154g00007	437	Gene3D	Phosphorylase Kinase; domain 1	99	211	-	-
	Mepo154g00007	437	ProSitePatterns	Protein kinases ATP-binding region signature.	132	164	IPR017441	GO:0005524
	Mepo154g00007	437	PANTHER	OS01G0588500 PROTEIN-RELATED	71	411	-	-
	Mepo154g00007	437	Pfam	Protein tyrosine and serine/threonine kinase	131	406	IPR001245	GO:0004672\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo154g00007	59	407	Glycoside Hydrolase	AT3G07070	45.070	1.36e-103	312

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-2	Mepo154g00007		PK_Tyr_Ser-Thr	1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo154g00007	-		-	gmx:100800654	575.089