Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo12g00043 ATGAATGGGGCTTTAAGACTGAGTTGCCAAAAAGGCTATCCTCTTCATGCTGTTAGGTCCCACAAGGAGAAACGTTCCTCTTGTGCTCCTGAAGCAGGAGTGAGATACGGCGGGGTTTATAGAATTGAAAAATGTTGGCGCAAAATTGGAAAACAAGTTAATAGAGAAATGATGGGTGTCATAGAATCACTCCAACTACAGGCTGAAGAGATGGAGAATAATTCTGAAGAATCAAGTGCTAAAGGCGGTGAAAATATTAAGTTGGATGAGAAGACAGAAGTTTCAAAACCATGCGATTCAAGTGAAGAAGTCTTGAAAGAAATTAATGAGGTTGATTTGAATCCTCCACATAAGCGGATGAAAAGTGATAAAGGCGAGGTTGTGGTGAACATGGTGTTAGCCTATAAAATTCACAGGCTCATTTAA 426 0.3991 MNGALRLSCQKGYPLHAVRSHKEKRSSCAPEAGVRYGGVYRIEKCWRKIGKQVNREMMGVIESLQLQAEEMENNSEESSAKGGENIKLDEKTEVSKPCDSSEEVLKEINEVDLNPPHKRMKSDKGEVVVNMVLAYKIHRLI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo12g00043 141 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 52 IPR045134 -
Mepo12g00043 141 Coils Coil 54 81 - -
Mepo12g00043 141 SUPERFAMILY PUA domain-like 1 52 IPR015947 -
Mepo12g00043 141 MobiDBLite consensus disorder prediction 68 101 - -
Mepo12g00043 141 Gene3D - 1 104 IPR036987 -
Mepo12g00043 141 ProSiteProfiles YDG domain profile. 1 68 IPR003105 -
Mepo12g00043 141 MobiDBLite consensus disorder prediction 74 101 - -
Mepo12g00043 141 Pfam SAD/SRA domain 2 52 IPR003105 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo12g00043 1 52 C2H2 Transcription Factor Family AT5G39550 67.308 7.10e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo12g00043 K10638 - rcu:8260093 92.4337