Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo12g00030 ATGGATGATGATGTGCTGAATATGCCCAATTGGGGTTACTATGAACCCTTCAAGGGCGGGAATCTCAGTCTGAACCTCATGCCTGCCATGAATGATCGTGAAACAAAACCATTTTTTCCTGGTCGTGATCCAGCTATGATAGGAAGTGCAAATGGGCCCTTGCCCTTTCAGCCACGAGATTCTGCTGTTTTGGAGTCTGCTACTCCGTTTAACTATGTGAGGGATAATTGGATGACCCCGAGACATAGGTTTATCAATATGCAGCTGACAAATCCAAATTATGTTGTTCTTCCAGAAGCATCACAAACACTCTCCTTGCCGGTTATACCGCAGCCTGATGCATCAAGAAATGAGAATGTGGAGAATGCTGAAGAATTGAGTGTCAAGAAGGAAGGTGGCAAGTCGAAGAAAAGGAAGTCTAGGGGTGTTGTTACCACTCCAAAAGCCAAGAAGCCCAGGAAGCCGAAGGATGATAGCAGTGTTTCACTGTGTATAATGATTCTGGAAGAAATCAACTTTCTTTTCATTAAACACTGA 537 0.4395 MDDDVLNMPNWGYYEPFKGGNLSLNLMPAMNDRETKPFFPGRDPAMIGSANGPLPFQPRDSAVLESATPFNYVRDNWMTPRHRFINMQLTNPNYVVLPEASQTLSLPVIPQPDASRNENVENAEELSVKKEGGKSKKRKSRGVVTTPKAKKPRKPKDDSSVSLCIMILEEINFLFIKH 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo12g00030 178 Pfam GAGA binding protein-like family 1 156 IPR010409 -
Mepo12g00030 178 MobiDBLite consensus disorder prediction 118 132 - -
Mepo12g00030 178 MobiDBLite consensus disorder prediction 109 159 - -
Mepo12g00030 178 PANTHER - 1 157 IPR010409 -
Mepo12g00030 178 SMART GAGA_bind_2 1 177 IPR010409 -
Mepo12g00030 178 MobiDBLite consensus disorder prediction 133 149 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo12g00030 1 162 BBR or BPC Transcription factor family AT2G01930 38.953 3.11e-18 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Mepo12g00030 GAGA_bind 6.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo12g00030 - - gmx:100814354 185.267