Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo11g00023 | ATGAAACTTTTCCAGACCGGTGGGCACGTGCCCGAGACTAATTACATTTTTATGGGTGACTTTGTTGATCGCGGTTACAATAGTCTTGAAGTATTCACCATCCTTTTGCTTCTTAAAGCTAGATACCCTGCTAATATAACCCTTCTACGTGGAAACCATGAAAGTAGACAACTCACACAGGCCAATGTTGTTAATTATGTAATGTAA | 207 | 0.3961 | MKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQANVVNYVM | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo11g00023 | 68 | Pfam | Calcineurin-like phosphoesterase | 11 | 57 | IPR004843 | GO:0016787 | |
| Mepo11g00023 | 68 | SUPERFAMILY | Metallo-dependent phosphatases | 1 | 60 | IPR029052 | - | |
| Mepo11g00023 | 68 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 49 | 54 | IPR006186 | GO:0016787 | |
| Mepo11g00023 | 68 | Gene3D | - | 1 | 66 | IPR029052 | - | |
| Mepo11g00023 | 68 | PRINTS | Serine/threonine phosphatase family signature | 48 | 68 | IPR006186 | GO:0016787 | |
| Mepo11g00023 | 68 | PRINTS | Serine/threonine phosphatase family signature | 15 | 42 | IPR006186 | GO:0016787 | |
| Mepo11g00023 | 68 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED | 1 | 61 | IPR047129 | GO:0004722 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo11g00023 | 15 | 59 | Calmodulin-binding Proteins | AT5G63870 | 53.333 | 2.15e-10 | 52.4 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo11g00023 | K15498 | - | nnu:104591541 | 124.79 |