Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo11g00011 ATGAATAGCTCTGGGGGTGGCAGTAGTAGTAACGGAGGTGTAGGGATGATGATGGGTTACAGTAAATCATCACCCTTCACAGTGTCTCAGTGGCAGGAACTTGAACATCAAGCTTTGATCTTTAAATATATGGTTGCTGGTCTTCCTGTTCCACCTGATCTTGTCCTTCCTATTCATTCCAGTTTTCACTCTCTTTCTTCCAATAACTTCTTTCACCATCCTATTCCTACCTTGAGTTACTGTTCCTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGAAGATGTAGAAGGACTGATGGAAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCGCTAACTGTCGCTGGTGGCAGCAGCAGAGCTGGTAACTTCCAGAACATTCCAACAACAAATGCATTTGGTAGTGTTCAAAATACTACAGGTTCTGGAACCGACCGTGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTATCTTCAAGGTCTTAAATCTGAGGGTGGAGAACATAGCTTCTTTGCAGAAGCTTCAGGAGGAGACAACAAGGGTCTCCAAATGGAGTCGCAGCTGGAAAACACATGGCCTCTGATGTCAACTAGAGTTGCCTCTTTTTCTGCATCAAAATCAAGCTGTAATAATTCCATGTTGCAGAGTGATTATCCCCAACATTCATTTTTATCTAGTGAATATGGATCTGGAGAAGCTGTGAAGGAAGAGGGCCAGCCTCTTCGACCCTTTTTCAGCGAATGGCCTAAGAGCAGAGAGTCATGGTCTGGTTTGGAAGATGAGAGATCCAACCAAACAGCATTCTCCACAACTCAACTTTCAATATCCATTCCTATGTCATCGTCTGACTTCTCTGCCACAAGCTCTCAGTCGCCACACGGTGAGATATATTTAAGTTTGGTAAAGTTTCAGATTGTATGCAATAAGCATCTATTAACCGAATCCCATAATTATATCGTTGCAGATAACTAG 1098 0.4435 MNSSGGGSSSNGGVGMMMGYSKSSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIHSSFHSLSSNNFFHHPIPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTVAGGSSRAGNFQNIPTTNAFGSVQNTTGSGTDRADYHLDTIPYGIPSKEYRYLQGLKSEGGEHSFFAEASGGDNKGLQMESQLENTWPLMSTRVASFSASKSSCNNSMLQSDYPQHSFLSSEYGSGEAVKEEGQPLRPFFSEWPKSRESWSGLEDERSNQTAFSTTQLSISIPMSSSDFSATSSQSPHGEIYLSLVKFQIVCNKHLLTESHNYIVADN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo11g00011 365 Pfam QLQ 25 58 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo11g00011 365 MobiDBLite consensus disorder prediction 130 155 - -
Mepo11g00011 365 Pfam WRC 90 132 IPR014977 -
Mepo11g00011 365 MobiDBLite consensus disorder prediction 121 155 - -
Mepo11g00011 365 SMART QLQ_2 24 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo11g00011 365 ProSiteProfiles QLQ domain profile. 25 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo11g00011 365 PANTHER GROWTH-REGULATING FACTOR 5 9 325 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo11g00011 365 ProSiteProfiles WRC domain profile. 89 133 IPR014977 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo11g00011 25 132 GRF Transcription Factor Family AT3G13960 64.220 4.15e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo11g00011 WRC 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo11g00011 - - gmx:100787226 489.96