Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo10g00006 ATGCATCACCTAACGGGCCAAGCAAACATCGTGGAACTGAAAGGTGCATATGAAGACAAACAATCGGTTCATTTGGTCATGGAATTATGCGCCGGTGGTGAACTATTTGATCGAATCATTGCAAAGGGACATTATACCGAACGTGCCGCAGCTTCTTTGATGAGAACCATTGTGCAAATAATTCATACTTTGCATTCAATGGGTGTTATTCATAGAGATCTTAAGCCTGAAAATTTCCTCTTGTTGAATAAGGATGAAAATGCACCCCTTAAGGCCACCGATTTTGGTCTATCCGTCTTTTTCAAAGAAGGAGAGATGTTCAAAGACATTGTTGGCAGTGCATATTACATAGCACCAGAGGTGTTGAAAAGAAGATATGGGCCTGAAGTTGACATTTGGAGTATTGGTGTCATGCTATACATTCTTCTTTCTGGTGTCCCTCCTTTTTGGGCAGAATCTGAACATGGTATATTCAATGCCATCTTAAGAGGCCACATTGACTTTACAAGCGATCCATGGCCTTCAATTTCACCTGCAGCAAAAGATCTTGTAAGGAAAATGTTAAATTCAGATCCCAAACAGAGACTTACAGCCTTTGAAGTTTTAAATCACCCATGGATCAAGGAGGATGGTGAAGCACCTGATAAACCTATTGACAATGCTGTACTAAATAGGCTCAAGCAGTTTAGAGCAATGAACCAATTTAAGAAAGTTGCTCTAAGGGTAATTGCTGGATGTTTATCAGAAGAAGAAATAATGGGTTTGAAGGAAATGTTCAAGGGGATGGACACTGACAACAGTGGAACCATTACAGTTGAAGAGCTCAAACAAGGACTTGCAAAGCAAGGCACCAAGCTTTCAGAACAAGAAGTTAAGCAGTTAATGGAAGCTGCTGATGCTGATGGCAATGGAACAATAGATTACGACGAGTTCATCACAGCAACAATGCACATGAACAGAATGAATAGAGAAGAACATCTTTACACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTTCATTACCACTGAAGAACTAGATCAAGCTCTCCGTGAATACAACATGCATGATGGTAGAGACATCAAAGAGATACTTCAAGAAGTTGATGGAGATAACGATGGACGTATTAACTATGATGAGTTTGCTGCAATGATGAGAAAAGGAAATCCGGAAGCTCATACAAAGAAGAGGCGTGATTCATTTGTTTCAACTTAG 1218 0.4007 MHHLTGQANIVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLMRTIVQIIHTLHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFFKEGEMFKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLSGVPPFWAESEHGIFNAILRGHIDFTSDPWPSISPAAKDLVRKMLNSDPKQRLTAFEVLNHPWIKEDGEAPDKPIDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITVEELKQGLAKQGTKLSEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNSGFITTEELDQALREYNMHDGRDIKEILQEVDGDNDGRINYDEFAAMMRKGNPEAHTKKRRDSFVST 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo10g00006 405 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Mepo10g00006 405 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Mepo10g00006 405 ProSitePatterns EF-hand calcium-binding domain. 263 275 IPR018247 -
Mepo10g00006 405 SUPERFAMILY Protein kinase-like (PK-like) 6 235 IPR011009 -
Mepo10g00006 405 CDD STKc_CAMK 9 206 - -
Mepo10g00006 405 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 382 - -
Mepo10g00006 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Mepo10g00006 405 FunFam calcium-dependent protein kinase 1 35 214 - -
Mepo10g00006 405 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Mepo10g00006 405 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Mepo10g00006 405 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Mepo10g00006 405 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Mepo10g00006 405 Pfam Protein kinase domain 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo10g00006 405 ProSiteProfiles EF-hand calcium-binding domain profile. 361 392 IPR002048 GO:0005509
Mepo10g00006 405 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo10g00006 405 SMART efh_1 254 282 IPR002048 GO:0005509
Mepo10g00006 405 SMART efh_1 361 389 IPR002048 GO:0005509
Mepo10g00006 405 SMART efh_1 326 354 IPR002048 GO:0005509
Mepo10g00006 405 SMART efh_1 290 318 IPR002048 GO:0005509
Mepo10g00006 405 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo10g00006 405 FunFam Calcium-dependent protein kinase 1 215 390 - -
Mepo10g00006 405 Gene3D Transferase(Phosphotransferase) domain 1 35 214 - -
Mepo10g00006 405 Gene3D - 215 394 - -
Mepo10g00006 405 Pfam EF-hand domain pair 255 315 IPR002048 GO:0005509
Mepo10g00006 405 Pfam EF-hand domain pair 324 387 IPR002048 GO:0005509
Mepo10g00006 405 SUPERFAMILY EF-hand 247 387 IPR011992 -
Mepo10g00006 405 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo10g00006 1 400 EF-hand Containing Proteins AT5G12180 86.750 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo10g00006 Pkinase 1.4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo10g00006 K13412 - gmx:100781355 775.778