Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo103g00004 ATGTCTCTCTACCAAGCTCCTGGTTTCCGATTCCACCCTACTGATGAAGAGATCGTTTGTTTCTACCTCAAGAGGAAACTCACCGGAAAGTTACCATCCTGTTTTGATCATCTTGCTTTCATCGACATCTACAAGTTTGAACCATGGGATCTTCCTAATATGTCCAAGCTGAAGACTAAGGATTTGGAATGGTACTTCTTCAGTTGGCTGGACAAGAAGTACGGCACTGGATGCAGGACGAATCGTGCTACTGATCGAGGTTATTGGAAGACTACTGGAAAGGATCGGGTTATCAAAAACGGGGAGGAGACAGTTGGAATGAAGAAGACCCTTGTTTATCACCTGGGTCGAGCCCCGCATGGTAATCGAAGCAATTGGGTCATGCATGAGTATAGGATGATTGATGAAGAATTGGCCAAAACTGGAGCGCAGGATTCTTATGTGGTGTGTAGGATCTTTGAGAAGAGTGGTTCAGGGCCTAAGAATGGGGAGAAGTATGGGGCTCCCTTCGTAGAAGCAGAATGGCAGAATGTTGATGAACCAGTCGATCCCTTGCCACCGGTTGATAATCAGCTTTTGGAACAACAAGTGGCTGCTCCTGCTCCTGATTACGCTGAATGGTTGCAATCCTTGGTGGCTTTTGATAACGATCTTTTGAATGAAAGAGTGCCTACTGCTACTGATGATAATTATCTTGAAATCCTTGACCTTGACCAGGAGCTTGATACTAGTGTTACAGTTGGAAATGCTGATTTACCACCAAACTTCTATTATGGGGAGTGTAGTAGCTTTCCTCAGCATTCCCAATCGGAAGCTGCTTTTGGTATTTATGATCACCAGGTTGGTCTATATGGTGTGGATTCAGTGCAAGATGGTAACAATGGCGAGACAAACCATAACGAAAATCCTCTGAACTTTGATTTTGCCTCTGAGGATCCAGATCTGTATTTTGATGCGGCTGAATATCTCAGGGGTTTGAACGAAGAATATGTTGAAACCAATGATCTTAAGAATCTTGATGGGGTTGATTCCACCGTGATAGATCCTTCTGTTTCTGCATTGCTAGATGAGTACCTTGAATGCCCTGATGAAGAAGATATTACCAAATATATATGCTTTGATTCTGAAAGCCCCATTGCTAACCATGGACAGTCTTTCATAGAGCAGAATGTGGAGGGCGAAGCTAATGGTAGTTCCTTGACAAACAATCATGTTTTTGAAGCACAGTATAGTAATGGAGTTTTACCTAGGGAGGATCAGGGAGCTGCATCGAATTGGGTCTCAGGAGGTGAAAATGCTTTTGTAAAGCAAGCCAATAAATTGTTGGCTGGCATACCAGCTCCTCCTGCATTTGCTTCTGAGTTTCCTTCTAAGGAGTTTGCTATTGGGATGCATTCTGCAGCTGAGTTTTCCAATTCAGCTCATATAACTACCGGTATGATTAGCATTACAGACATTACTTACGATGGCAATGTGATGGATTGGATGGCCGGCAAGAATGGAGGTTTTAACACCATATTGTCTACTGAATTTTCCCAAACTGCTGCTATTAACTCTGCTACTGGCTTGGTCTGTAGGAAAACTGCATGTATGTTATCACATGGTTGGGTTTACTTGATGGGTTTCTCAGTTGTGATTCTTTCAATGAGTTTGAAGATTGGAAGCTTCATGTATATGGGTAAATGA 1686 0.4288 MSLYQAPGFRFHPTDEEIVCFYLKRKLTGKLPSCFDHLAFIDIYKFEPWDLPNMSKLKTKDLEWYFFSWLDKKYGTGCRTNRATDRGYWKTTGKDRVIKNGEETVGMKKTLVYHLGRAPHGNRSNWVMHEYRMIDEELAKTGAQDSYVVCRIFEKSGSGPKNGEKYGAPFVEAEWQNVDEPVDPLPPVDNQLLEQQVAAPAPDYAEWLQSLVAFDNDLLNERVPTATDDNYLEILDLDQELDTSVTVGNADLPPNFYYGECSSFPQHSQSEAAFGIYDHQVGLYGVDSVQDGNNGETNHNENPLNFDFASEDPDLYFDAAEYLRGLNEEYVETNDLKNLDGVDSTVIDPSVSALLDEYLECPDEEDITKYICFDSESPIANHGQSFIEQNVEGEANGSSLTNNHVFEAQYSNGVLPREDQGAASNWVSGGENAFVKQANKLLAGIPAPPAFASEFPSKEFAIGMHSAAEFSNSAHITTGMISITDITYDGNVMDWMAGKNGGFNTILSTEFSQTAAINSATGLVCRKTACMLSHGWVYLMGFSVVILSMSLKIGSFMYMGK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo103g00004 561 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 238 - -
Mepo103g00004 561 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Mepo103g00004 561 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Mepo103g00004 561 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Mepo103g00004 561 FunFam Nac domain-containing protein 86 14 158 - -
Mepo103g00004 561 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo103g00004 6 549 NAC Transcription Factor Family AT5G04410 37.349 1.15e-102 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo103g00004 NAM 9.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo103g00004 - - mtr:25479871 1047.73