Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g4021 ATGAACCATCAACAACCTACTCAAGACCAAATCATGCTTATGTCTCAGTTATTAATCCCAGCTTATGAATACACTCAAATAGTTTCTCCACAACGGGAGAAGAAGCCAAAGCGCAAGCGTAGTAGGAAGAACAAAGGTGGAGAAAGTGCTAATGAACTGAACAAAAAGAGGAAATTGAGTGAAAAACAAGTGAATATTTTGGAGCAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAAGCTTGCAATGGAGCTAGGTTTGGATCCTAGACAAGTTGCGGTTTGGTTTCAGAATCGAAGAACTAGGTGGAAGAACAAGAAACTTGAAGAAGAGTACTCAAATCTTAAAAAATTCACTGAATCCACCATGCTTGAGAAGTGTCTCCTAGAAACCGAGGTGTTGAAGCTAAGGGAGAAACTCTCCGAAGCTGAGAAAGAAACTCAAAGGCTTCGAGAGCCAATTCAAAGGATAACAAGTAGTAGTTCAAGTACTTCATCTCAGTCAATGGAAGTGGTGGATCCACCCTTTCTTGGTGAATTTGGTGTTGATAATGGATATGATGATGATGATGTGTTTTTCAATGGCATGGAGTGGATAAATTTGTACATCTAG 624 0.3894 MNHQQPTQDQIMLMSQLLIPAYEYTQIVSPQREKKPKRKRSRKNKGGESANELNKKRKLSEKQVNILEQNFGNEHKLESEKKDKLAMELGLDPRQVAVWFQNRRTRWKNKKLEEEYSNLKKFTESTMLEKCLLETEVLKLREKLSEAEKETQRLREPIQRITSSSSSTSSQSMEVVDPPFLGEFGVDNGYDDDDVFFNGMEWINLYI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g4021 207 MobiDBLite consensus disorder prediction 149 173 - -
Mal8g4021 207 CDD homeodomain 55 111 IPR001356 GO:0003677
Mal8g4021 207 MobiDBLite consensus disorder prediction 28 61 - -
Mal8g4021 207 PRINTS Lambda-repressor HTH signature 90 106 IPR000047 GO:0003677
Mal8g4021 207 PRINTS Lambda-repressor HTH signature 81 90 IPR000047 GO:0003677
Mal8g4021 207 Pfam Homeodomain 55 109 IPR001356 GO:0003677
Mal8g4021 207 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
Mal8g4021 207 SMART HOX_1 53 114 IPR001356 GO:0003677
Mal8g4021 207 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Mal8g4021 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 8 206 IPR045224 GO:0003700
Mal8g4021 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 8 206 - -
Mal8g4021 207 MobiDBLite consensus disorder prediction 45 61 - -
Mal8g4021 207 Gene3D - 46 119 - -
Mal8g4021 207 Coils Coil 50 70 - -
Mal8g4021 207 MobiDBLite consensus disorder prediction 157 173 - -
Mal8g4021 207 SUPERFAMILY Homeodomain-like 55 118 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g4021 Mal-Chr8 115699870 115701284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g4021 1 207 Homeobox Transcription Factor Family AT4G36740 49.091 9.22e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mal8g4021 Homeodomain 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g4021 K09338 - gmx:100809616 283.493