Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g4018 ATGACTAGCTGCAGCAACTCATCTTCTTTAGCTCTTGTGACATCATCTCCTACAAGAAATTATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCAACAATTTCACTGATTATCTTTTTGATGCCCTTGAAACTAAAGGCATTTTTGTATTTCGGGATGACACTAATCTTCAAAAAGGCAAATCGATAGGACCTGAGCTCCTTCGAGCAATTGAAAGATCTCAGGTTTTCGTTGCGGTCTTCTCAAGGAACTATGCTTCCTCAACATGGTGCTTGCAAGAACTAGAAAATATATGTGAATGTGTTTTGGTATCTGGAAAACATATTCTTCCTGTTTTCTATGATGTTGATACTTCTGAGGTGCGAAAGCAAAATGGGATTTATGGTGAAGCCTTTACTAAACATGAACAAAGATTCCAACAAAACTCTCAGATGGTGTTAAGATGGAGGGAAGCTCTAAAACACGTGGGGAATATCTCTGGTTGGGATCTACGTGATAAGCCACAATCTTCAGAGATTAAAAAGATTGTTCAAAAGATAATGAATATATTAGAGTGCAAATCTTCATGTGTTTCAAAAGATTTAGTTGGGATGGTTTCTCCTTTAGAAGCATTACAAAACCATTTACTGTTGGACTCGGTTGATGGTGTTCGTGCTATAGGAATTTGTGGGATGGGAGGAGTAGGGAAGACAACCCTTGCTACAGTTTTATATGGGCAAATCTCTCATCGATTTAGTGCATCGTGTTTCATTGATGATGTGAGCAAAATTTATAGATTACATGATGGTCCACTCGGTGCACAAAAGCAAATCCTACTTCAAACTCTCGGCATAGAACACAATCAAATATGCAATCATTACAGCGCAACTAATTTGATACGAAGTAGGCTATCTCATGAAAGGGTCCTTGTGATTCTAGATAATGTTAATCAAGTTGAACAGCTGGAAAAAATATCTGTGCATCGTGAATGGTTAGGTGTGGGGACAATTACAGTATTGGGCTCATTTTTGTTTGGTCGTAATGTGACTGAATGGAAGAGTGCATTGGTTAGATTGAGAGAAAGTCCAGATAAAGATGTCATGAATGTGCTGCAATTAAGTTTTGATGGGCTAGAGGAGACCGAAAAAGAAATATTTCTTCATATTGCTTGTTTTTCAATCTTTGATTCGGAGAAATATTTAAAAAATGTTCTAAATTGTTGTGGATTTCATGCTGATATTGGATTAAGAGTTCTCATTGACAAATCACTTATAAGCATTGAGAATACAATGATTAAAATGCATTCTTTGTTGAAAGAACTAGGCAGAAAAATTGTACAAGAACAAAGAAAGTGGAGCAGGGTGTGGTCCAAAAAACTACAATGTTATGATGGAGAAAATGGTAAAAAAAAGCATGTTGAAGCCATAGTTTTGGATGATGTGGGAGAGATTGATATGAACATTGAACACTTGTCAAAAATGAGTAATCTTAGATTGCTCATCATCTTCAAGTATAGTGGAAATATCTCAGAAAGTCCAAGTTGTCTTTGGAACGAATTAAGATATGTTGAGTGGCATGAATATCCTTTCATGTATTTGCCATTAAATTTTCAGCCCAATCAACTTGTTGATTTGATCTTGAAGAGTAGCAACATCAAACAACTATGGAAAAACAAGAAGTATCTGCCCAATTTGAAAACTTTGGATCTAAGAAACTCCAAAAAACTAGTAAAGATACTAGATTTTGGAGAGTTCCCGAATCTTGAGTGGCTTAATCTGAAAGGATGTGTAAAACTTGTGAAAAAGCTTGTTTACTTGAATGTAAAAGATTGCAAAAAACTAGAAAGCATACCCAACAACATATTTGGTCTGAGCTCTCTTAAAGATCTAAATATGCATGGTTGTTCCAAAGTGTTTAACAATCCAAGGCATTTGAAGAATCCTGATATATCCTTAAGAAAGAAGAAGAAGCATGATATAAGTGAAAGTGCATCACATTCCCAATCGATTCCCTCCGTCTTCAAAAGGACCATATTGCCTCACCATTCATCTCCAAATTTGAAGTTGCCTCCCACTTCAAATTTGCTGCCAAATTCCTTGCATAGCTTATATTGTTTGCGTAAAGTTGATATAAGCTTTTGCCGTCTAAGACAAGTCCCTGATGCCATTCAACATTTACGTTGTCTAGAAAGATTAGATTTAGGGGGAAACAACTTTGTGACTCTACCTAGCCTGAAGGATCTTTCCAAACTTGTATACTTAAATGTGGAGCATTGCAGGTTGTTGGAATCTTTGCCTCAACTTCTTTTTCCTACCGTTATCGAGTGGGATCATCATAAGACCAAAGGTTGGTGTAGAATAGGAATGGTCATTTTCAATTGTCCAAAGTTGGGTGAGAGGGAACGTTGCAGTAGAATGACAGTTTCATGGATGATACAATTCATTCAGGCAAACCCACAGTCTTACCCTACCTACTTTGATGGGATTCATATTGTTACTCCTGGAAGTGAAATACCAAGTTGGATCAGCAATCAGAGAGTGGGTGGTGCCATCCTAGTAAACCCATCTCCTACTATGCATGACAATAACAATATCCTTGGCCTTGTATGTTGTGTAGAATTTTCAATGGCACCTCATGATCCAACAATGATAAGAAGTTTTCCATCGAGGGCTCATATGACACTGCAAATCGGTAATATTGGCCGTCGGAGGAGCCTTACCATTCTTCCAGTAATTCTCGATAGAGATCTTAATACGACCAAATCAAGTCACCTATGGCTAATCTACTTCCCACGAGAGTTATCCTATGATGGACCTATGTGTGTCGACGTTATTAGGGGTGAAGGTGTTGGTATGAAACTGAAGAATTGTGGGTACCATTGGGTATCTAAACAAGACCTAGAAATGTTCGACTTAGCAATGATGTATCTTGAAAATTCCTTATCTCGGAAGCGCAAGATTTTGGCGATTGAAGATGAGACACAACCGCAACCACAACCAAAATCATTCATATCATAA 3003 0.3753 MTSCSNSSSLALVTSSPTRNYYDVFVTFRGEDTRNNFTDYLFDALETKGIFVFRDDTNLQKGKSIGPELLRAIERSQVFVAVFSRNYASSTWCLQELENICECVLVSGKHILPVFYDVDTSEVRKQNGIYGEAFTKHEQRFQQNSQMVLRWREALKHVGNISGWDLRDKPQSSEIKKIVQKIMNILECKSSCVSKDLVGMVSPLEALQNHLLLDSVDGVRAIGICGMGGVGKTTLATVLYGQISHRFSASCFIDDVSKIYRLHDGPLGAQKQILLQTLGIEHNQICNHYSATNLIRSRLSHERVLVILDNVNQVEQLEKISVHREWLGVGTITVLGSFLFGRNVTEWKSALVRLRESPDKDVMNVLQLSFDGLEETEKEIFLHIACFSIFDSEKYLKNVLNCCGFHADIGLRVLIDKSLISIENTMIKMHSLLKELGRKIVQEQRKWSRVWSKKLQCYDGENGKKKHVEAIVLDDVGEIDMNIEHLSKMSNLRLLIIFKYSGNISESPSCLWNELRYVEWHEYPFMYLPLNFQPNQLVDLILKSSNIKQLWKNKKYLPNLKTLDLRNSKKLVKILDFGEFPNLEWLNLKGCVKLVKKLVYLNVKDCKKLESIPNNIFGLSSLKDLNMHGCSKVFNNPRHLKNPDISLRKKKKHDISESASHSQSIPSVFKRTILPHHSSPNLKLPPTSNLLPNSLHSLYCLRKVDISFCRLRQVPDAIQHLRCLERLDLGGNNFVTLPSLKDLSKLVYLNVEHCRLLESLPQLLFPTVIEWDHHKTKGWCRIGMVIFNCPKLGERERCSRMTVSWMIQFIQANPQSYPTYFDGIHIVTPGSEIPSWISNQRVGGAILVNPSPTMHDNNNILGLVCCVEFSMAPHDPTMIRSFPSRAHMTLQIGNIGRRRSLTILPVILDRDLNTTKSSHLWLIYFPRELSYDGPMCVDVIRGEGVGMKLKNCGYHWVSKQDLEMFDLAMMYLENSLSRKRKILAIEDETQPQPQPKSFIS* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g4018 1000 Pfam TIR domain 22 186 IPR000157 GO:0007165
Mal8g4018 1000 PRINTS Disease resistance protein signature 555 571 - -
Mal8g4018 1000 PRINTS Disease resistance protein signature 221 236 - -
Mal8g4018 1000 PRINTS Disease resistance protein signature 298 312 - -
Mal8g4018 1000 Pfam Leucine rich repeat 701 756 IPR001611 GO:0005515
Mal8g4018 1000 Gene3D - 187 336 IPR027417 -
Mal8g4018 1000 Gene3D - 14 186 IPR035897 -
Mal8g4018 1000 SUPERFAMILY L domain-like 429 762 - -
Mal8g4018 1000 SMART till_3 21 161 IPR000157 GO:0007165
Mal8g4018 1000 ProSiteProfiles Leucine-rich repeat profile. 723 744 IPR001611 GO:0005515
Mal8g4018 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 330 IPR044974 GO:0006952
Mal8g4018 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 557 762 IPR044974 GO:0006952
Mal8g4018 1000 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 332 553 IPR044974 GO:0006952
Mal8g4018 1000 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 332 553 - -
Mal8g4018 1000 Pfam NB-ARC domain 204 323 IPR002182 GO:0043531
Mal8g4018 1000 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 23 330 - -
Mal8g4018 1000 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 557 762 - -
Mal8g4018 1000 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Mal8g4018 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 384 IPR027417 -
Mal8g4018 1000 Gene3D Ribonuclease Inhibitor 661 800 IPR032675 -
Mal8g4018 1000 Gene3D Ribonuclease Inhibitor 422 660 IPR032675 -
Mal8g4018 1000 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g4018 Mal-Chr8 115664076 115668671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g4018 346 750 WRKY Transcription Factor Family AT4G12020 31.757 1.10e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g4018 - - mtr:MTR_4g080070 849.351