Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g4002 ATGAATAGAGGGGTTGTTCAAAGCTCACCGGTGCAACAAATGATGGCTAGTAACCCTAATTGGTGGAACATCAATAACATGAGACCTCCATCTCCACAACCTCCTCCTTTCATTTCATCTCCTTCTAACTTTCTCACCCCTAATTATGCACCAACTTCATCTTTGCTTCCTTTTTCTTCTTGGCATGAAAATCATCAAGAACTTCCTGAAAATTGGAGTCAACTACTCATGGGTGGAATTGTTGGTGAGGAAGATAAGATTGGTATGAGCCAATTTCAAAATCAAATGCTAATAAGTCAAGCTCCAAATGCTTCTCTTGTTGATGTTAAACAAGAAAGCTCGGGAAATAGCTATGCATATGGACATGGAAATGAAGAACTTAATTCATGTGTGACAAGTTTCAACAACAACATGTTGGATTTCACAAACAATAATAGTAATACAGATTTGAGGCATCCACCACTTGATCGATCTTCTGAGTGCAATAGCACTGCATCTGGTGGGGCAATGAAGAAAGCTAGGGTTCAACAAACTACAACTCAATCTACATTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTTGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCTATTGGTTATATCAGATTCCTTCAGGGTCAAATTGAGGCTCTTAGCTTGCCATACTTGAGCAATGGATCAGGAAATACAAGGCAACAACATTTAGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTCCTAAATGAAAATAGCTTGAAGAGGAAAGCTGCTGAAGAGGTTTCTCAAGAAGAACCAAAGAAGGACTTAAAGAGTAGAGGGTTGTGTCTTGTTCCAGTGTCATGTACACTACAAGTTGGGAATGACAATGGAGCTGATTATTGGGCACCTGCCCTTGGAGGAGGCTTTCGGTAG 966 0.4068 MNRGVVQSSPVQQMMASNPNWWNINNMRPPSPQPPPFISSPSNFLTPNYAPTSSLLPFSSWHENHQELPENWSQLLMGGIVGEEDKIGMSQFQNQMLISQAPNASLVDVKQESSGNSYAYGHGNEELNSCVTSFNNNMLDFTNNNSNTDLRHPPLDRSSECNSTASGGAMKKARVQQTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSLPYLSNGSGNTRQQHLVQGEKNCLFPEDPGQLLNENSLKRKAAEEVSQEEPKKDLKSRGLCLVPVSCTLQVGNDNGADYWAPALGGGFR* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g4002 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 236 IPR036638 GO:0046983
Mal8g4002 321 PANTHER OS05G0228400 PROTEIN 16 307 - -
Mal8g4002 321 CDD bHLH_AtbHLH_like 183 232 IPR045239 -
Mal8g4002 321 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 307 - -
Mal8g4002 321 MobiDBLite consensus disorder prediction 149 183 - -
Mal8g4002 321 Gene3D - 176 236 IPR036638 GO:0046983
Mal8g4002 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g4002 Mal-Chr8 115456509 115461659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g4002 1 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.228 1.53e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g4002 - - gmx:100786555 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g4002 8 115456509 115461659 Mal8g4002 8 115456509 115461659 ECH
Mal7g5212 7 121308727 121312486 Mal8g4002 8 115456509 115461659 PCT