Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3992 ATGGATCCTCCAACAAAGAGTTGGAGCATCCATACCCGACCCGAAATAACAACCAAGTATCAAATCCTCGCCCACATCGGCTCCGGCACCTACTCCGACGTCTACAGCGGCCACCGTCTCTCCGACGGAACACCCGTCGCGTTGAAAGAAATCCATGACCACCAATCAGCTTCACGTGAAATCACCGCTTTACGTATTCTTCGGGGCTCCGAAAACGTTGTGTTCATGCATGAATTCTTCTGGCGAGAGGATGAAGATGCTGTGATCGTGCTGGAGTTTCTGAGGACTGATCTGGGTGCTGTGATCAGAGAGGGATTTGGTGGTGGTGAGGTGAAAGGGTGGATGAAGCAGATTGTTAGTGGGGTGTATGATTGTCATAGGAATGGGATTGTTCATAGAGATTTGAAGCCGGAGAATTTCTTGGTTTCGGAAAATGGGGTTTTGAAAATTGCAGATTTTGGACAGGCAAGGATACTTGTGAAGTCTGGATTTGATGCAACAAATCATGGAAGTTCATCCCAACATCCTCATGATGTTATTCCCTTATCAGACAACACAAACCAAACTGGATTTGAAAGTCAAGAGGAGGAAGAAAGAATGACTCATGATGAATATTTTAGAGTGTTAGATGAGCTGAAAATTAAGAGTCACACATATGACACTGATGATAAGGACACAAACACGCACGATGGTAACAACTCATGTCTCGCAACTTGCACAACCAGCGATGACGGTGATGAAGCTTGGAGGAATTCTTTGCCATATGAAGCAGGTGAAGAAGAAGAAGGGAATGAAGAACATGGATTTCTCACATCATGTGTTGGAACTAGATGGTTTAGGGCTCCTGAACTACTTTACGGTTCCACTAACTATGGTTTGGAGGTTGATCTTTGGTCATTAGGATGTGTCTTTGTTGAGTTGTTAACATTGAAGCCTTTGTTTCCTGGAACAGCTGATATTGATCAGATTAGTAGAATCATTAGTGTTTTGGGTAACCTCGATGAGGAAGTTTGGAATGGTTGTTCTAAACTTCCTGATTATGGAAGAATTTCTTTTACTAAGGTGGAAAACCCTATTGGTCTTGAAGCATGCATGCCAAATTGTTCGCATGATGAGGTTTCGTTAGTCAAAAGATTGGTTTGTTATGATCCAGCTAGGAGATCCACTGCGGCGGAGTTACTTCATGACAAGTACTTCACTGAAGAACCACTTCATATTCCTGTTTCTGAGCCGTGGGTTCCTTAA 1245 0.4345 MDPPTKSWSIHTRPEITTKYQILAHIGSGTYSDVYSGHRLSDGTPVALKEIHDHQSASREITALRILRGSENVVFMHEFFWREDEDAVIVLEFLRTDLGAVIREGFGGGEVKGWMKQIVSGVYDCHRNGIVHRDLKPENFLVSENGVLKIADFGQARILVKSGFDATNHGSSSQHPHDVIPLSDNTNQTGFESQEEEERMTHDEYFRVLDELKIKSHTYDTDDKDTNTHDGNNSCLATCTTSDDGDEAWRNSLPYEAGEEEEGNEEHGFLTSCVGTRWFRAPELLYGSTNYGLEVDLWSLGCVFVELLTLKPLFPGTADIDQISRIISVLGNLDEEVWNGCSKLPDYGRISFTKVENPIGLEACMPNCSHDEVSLVKRLVCYDPARRSTAAELLHDKYFTEEPLHIPVSEPWVP* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3992 414 SUPERFAMILY Protein kinase-like (PK-like) 12 404 IPR011009 -
Mal8g3992 414 PANTHER CYCLIN-DEPENDENT KINASE 10 18 405 - -
Mal8g3992 414 ProSiteProfiles Protein kinase domain profile. 20 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3992 414 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Mal8g3992 414 Gene3D Transferase(Phosphotransferase) domain 1 105 407 - -
Mal8g3992 414 Pfam Protein kinase domain 20 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3992 414 Pfam Protein kinase domain 266 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3992 414 SMART serkin_6 20 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3992 414 Gene3D Phosphorylase Kinase; domain 1 11 104 - -
Mal8g3992 414 PANTHER CELL DIVISION PROTEIN KINASE 18 405 - -
Mal8g3992 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3992 Mal-Chr8 115282916 115285496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3992 4 414 Core Cell Cycle Gene Families AT4G28980 59.259 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Mal8g3992 Pkinase 1.4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3992 - - gmx:548056 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3992 8 115282916 115285496 Mal8g3992 8 115282916 115285496 ECH
Mal7g5216 7 121341184 121343501 Mal8g3992 8 115282916 115285496 PCT