Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3976 ATGTCGACTGCTCCGGCACCATCTTCGCCGCCGGCGGGTAACGCCACCGCACCACCGCCGTCAACTCCTGCGAATCCACCACCTGCAACGCCTTCTGCACCACCACCTTCAACTCCTTCATCACCACCTCCGGCAACACCTTCATCACCGCCGCCTTCGACGCCGGCCACACCCTCTGCTCCGCCGCCGTCGACTCCAGCAACACCTTCAACACCACCTCCGACGACGACTCCATCTGCACCACCACCATCAACACCTTCAATTTCACCACCATCACCACCAACTCCGGAGACATCACCACCGTCAACTTCGCCGTCACCACCTTCCGGTGGAGGCACTACTCCGACCCCACCTTCCGGCGGAGGCACTACTCCGACTACACCTTCCCGGACCCCACCAAGCTCTGATGGAAGCCCATCACCACCTGCCTCAAAATCTCCGCCGTCACCACCTTCACCACCGTCGTCATCTTCAACTGTTTCAACCGGAGTTATCGTTGGTATCGCCGTCGGAGCGGTGGCGATTCTTGTGGTGTTGAGCATTCTGTGCATTTGCTGTAGGAAGAAAAAGAGAAGACGTGATGAAGAATACTATGGTCAGCAGAATCATCAGCAACCACCACCATCATTTCAGGCACCCAAAATTGATCCTTATGGTGGTCCACCACAACAATGGCAACATAATGCTCACCCTCCTTCCGATCATATAGTCTCGAAGCCACCACCTCCTGCTCCAATTCCATCACGACCGCCATCTCATGTTGCACCGCCCCCACCGCCTCCTTTCATCAGCAGCAGTGGTGGTTCCGGATCAAACTATTCAGGCGGCGAACTACTTCCACCTCCTTCTCCAGGCATTGTATTTAGCTCCGGAAAAAGCACGTTTACATACGAAGAGTTGGCGCGCGCAACCGACGGCTTCTCTGATGCTAACCTCCTCGGTCAAGGTGGATTTGGATATGTGCATAGAGGTATTCTCCCTAACGGTAAAGAGGTTGCTGTTAAGCAGCTAAAAGCTGGAAGTGGACAAGGAGAGCGTGAATTTCAAGCTGAAGTTGAGATTATCAGCCGTGTTCATCACAAACATCTTGTTTCTCTTGTTGGATACTGCAGCACTGGATTTCAGAGGCTACTTGTTTATGAATTTGTTCCTAACAATACCTTGGAATTCCATTTACATGGGAAAGGACGACCAACAATGGATTGGTCTACAAGACTGAGAATTGCTTTAGGATCTGCAAAAGGACTGGCTTATCTTCATGAAGATTGTCATCCTAAGATCATTCATCGTGATATTAAAGCTGCTAACATCCTTCTCGATTTTAAGTTTGAAGCAAAGGTTGCTGATTTTGGTCTTGCAAAGATTGCTTCTGATCTCAACACTCATGTTTCTACTCGAGTCATGGGGACTTTTGGGTATCTGGCTCCCGAATATGCAGCTAGTGGAAAACTTACAGATAAATCAGATGTTTTCTCTTATGGAGTCATGCTCCTTGAGTTATTAACTGGACGACGACCGGTTGATAAAGATCAGACTTACATGGACGATAGTTTGGTTGAGTGGGCTAGGCCTTTGCTCATGCGTGCTTTAGAAGAAGAGAATGTAGATTCTCTGATTGATCCAAGGCTTCAGAATGAATTTGACCCTAACGAGATGACTCGTATGGTGGCATGCGCTGCAGCTTGCACACGTCACTCAGCAAAGCGTCGACCAAAGATGAGCCAGGTTGTGCGCGCTCTAGAAGGAGATGTGTCACTAGCAGATCTTAACGAAGGGGTTAGACCTGGACACAGCAGTGTCTACAGTTCTCATGAAAGCTCCGATTACGATACTCAACAATACAAAGAAGACATGATAAAGTTCAGAAAAATGGCATTAGGAACTCAAGAGTATGCCGGAAGCAGCGAGTACAGTGGAGCTACAAGTGAATACGGTTTAAACCCGTCTGGCTCAAGCAGTGAAAACCAAAGCCGTCAGACAACAAGGGAAATGGGTCAGACAACAAGGGAAATGGAATTGAGAAAGATGAAGAACAGTCAAGGATTCAGTGGAAGTTCATGA 2061 0.4905 MSTAPAPSSPPAGNATAPPPSTPANPPPATPSAPPPSTPSSPPPATPSSPPPSTPATPSAPPPSTPATPSTPPPTTTPSAPPPSTPSISPPSPPTPETSPPSTSPSPPSGGGTTPTPPSGGGTTPTTPSRTPPSSDGSPSPPASKSPPSPPSPPSSSSTVSTGVIVGIAVGAVAILVVLSILCICCRKKKRRRDEEYYGQQNHQQPPPSFQAPKIDPYGGPPQQWQHNAHPPSDHIVSKPPPPAPIPSRPPSHVAPPPPPPFISSSGGSGSNYSGGELLPPPSPGIVFSSGKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCSTGFQRLLVYEFVPNNTLEFHLHGKGRPTMDWSTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKIASDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELLTGRRPVDKDQTYMDDSLVEWARPLLMRALEEENVDSLIDPRLQNEFDPNEMTRMVACAAACTRHSAKRRPKMSQVVRALEGDVSLADLNEGVRPGHSSVYSSHESSDYDTQQYKEDMIKFRKMALGTQEYAGSSEYSGATSEYGLNPSGSSSENQSRQTTREMGQTTREMELRKMKNSQGFSGSS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3976 686 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 87 663 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 196 285 - -
Mal8g3976 686 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Mal8g3976 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 87 663 - -
Mal8g3976 686 CDD STKc_IRAK 313 582 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 590 609 - -
Mal8g3976 686 Pfam Protein tyrosine and serine/threonine kinase 312 580 IPR001245 GO:0004672|GO:0006468
Mal8g3976 686 MobiDBLite consensus disorder prediction 1 160 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 635 664 - -
Mal8g3976 686 ProSiteProfiles Protein kinase domain profile. 307 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3976 686 Gene3D Phosphorylase Kinase; domain 1 283 382 - -
Mal8g3976 686 SMART serkin_6 307 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3976 686 MobiDBLite consensus disorder prediction 235 264 - -
Mal8g3976 686 Gene3D Transferase(Phosphotransferase) domain 1 383 590 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 635 686 - -
Mal8g3976 686 SUPERFAMILY Protein kinase-like (PK-like) 284 580 IPR011009 -
Mal8g3976 686 PRINTS Proline rich extensin signature 7 28 - -
Mal8g3976 686 PRINTS Proline rich extensin signature 28 44 - -
Mal8g3976 686 PRINTS Proline rich extensin signature 58 83 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 115 131 - -
Mal8g3976 686 MobiDBLite consensus disorder prediction 11 114 - -
Mal8g3976 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Mal8g3976 686 MobiDBLite consensus disorder prediction 132 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3976 Mal-Chr8 114961511 114965410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3976 126 662 Trihelix Transcription Factor Family AT1G70460 50.279 3.81e-171 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal8g3976 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3976 8 114961511 114965410 Mal8g3976 8 114961511 114965410 ECH