Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3964 ATGGGAATGGAGCAAAACAACGTGATTGCACCGTTCATTATGAAGACATATCACATGGTTAACGAACCAAACATAGATAACCTTATCAAGTGGGGTCCATCTAACAACAGTTTCATCGTCCTCGATCCCTTAGATTTCTCTCACTCCCTTCTCCCTCTTTTCTTCAAACACAACAATTTCTCTAGCTTTGTTCGTCAACTCAACACATACGGTTTCAGAAAAGTGGATCCGGATAGATGGGAATTTGCGAATGAGTGGTTTCTAAGAGGACAAAAGCACTTATTGAAGAACATAGTTAGGAAGAAGCATGTTGGTGGAGTTGGAAATGGAAAGAATAATAATTATTATAACAATAATAATTATTTTAATGAGGTGAAATTTGAAGATTTAGAAGAAGATGAAGCTATGGTGATGGAGATAGCGAAGCTAAAAGAAGAACAAAGAAATTTAGAACAAGAGCTTCAAGGAATGAACAAGAGACTAGAAACAACAGAAAAAAGACCACAACAAATGATGGCTTTTCTATGCAATGTCGTTGAAGATCCTCAAATTCTATCTAGAATACTCAATGAAAGAGAGAATAAAAAATTTGTTGATAAGAAAAAACGACGGTTGATATCGCCGCCGGAGACGGCGGGGATGACGGTGGCAACTACCTCGACTTCCTCCGAATCCTCCGGCATGGCGGTGGTGAATTCTGTGAAAGTGGAGTTTGAGGAAGACGAGGTAGCGGTTGCGAATAATATGATGTCGTCTTCGCCGGAGAAAGGTTTTGAAATTGATTATTTCCACCGTGCGCCGCCGAGGGAGGTGGCTCCGGTGAGTGGTTGGTGGGGGCAGACGGAGATTGGACAAATGGGTTATGGAAATGATTGTGGAGGTGCTCCGACGCCGATGACGGTGGTCTCTCCGACGCCGGTGATGTGGGGTGAGAATAGAAGTGATAGTAGAATGGCGGCGGAGAATAGTAAGTTGCCACCTTATCCTTTTTCATTGTTAGAAGGTGGCTTTTAG 1014 0.425 MGMEQNNVIAPFIMKTYHMVNEPNIDNLIKWGPSNNSFIVLDPLDFSHSLLPLFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLKNIVRKKHVGGVGNGKNNNYYNNNNYFNEVKFEDLEEDEAMVMEIAKLKEEQRNLEQELQGMNKRLETTEKRPQQMMAFLCNVVEDPQILSRILNERENKKFVDKKKRRLISPPETAGMTVATTSTSSESSGMAVVNSVKVEFEEDEVAVANNMMSSSPEKGFEIDYFHRAPPREVAPVSGWWGQTEIGQMGYGNDCGGAPTPMTVVSPTPVMWGENRSDSRMAAENSKLPPYPFSLLEGGF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3964 337 ProSitePatterns HSF-type DNA-binding domain signature. 51 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 10 252 - -
Mal8g3964 337 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 252 IPR027725 -
Mal8g3964 337 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 Coils Coil 133 167 - -
Mal8g3964 337 SUPERFAMILY "Winged helix" DNA-binding domain 9 101 IPR036390 -
Mal8g3964 337 Pfam HSF-type DNA-binding 12 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 SMART hsfneu3 8 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal8g3964 337 Gene3D - 4 102 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3964 Mal-Chr8 114597688 114599054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3964 8 205 HSF AT3G24520 62.376 9.84e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal8g3964 HSF_DNA-bind 7.3e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3964 K09419 - gmx:100794896 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3964 8 114597688 114599054 Mal8g3964 8 114597688 114599054 ECH