LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal8g3959	ATGTTCAAATTTCTAAAAGATGTTGTTGGTGGATCTGGAACTGGCCTTAGAGATCTCCCATACAACATTGGCGAACCTTTCCCTTCCGCTTGGGGCTCTTGGCTTCATCATCGCGGTACCTCCAAGGATGACGGTTCACCGGTTTCAATTTTTTCATTATCTGGAACCAATGCTCAGGATGGACATTTAGCTGCGGGTCGTAATGGTGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCATTTCTTCATAGTACTGAGATTGAAACTTTTGATGGCGGTTCTTCTAAGGTTACAATTTATATTGTGACTGAACCTGTAATGCCACTTTCAGATAAGATTAAGGAGTTAGGTCTTGAAGGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAAATATCGAAAGCCGTGAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACGCCAACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGTAATGAGACATCCTCTACGCAAATGCTGCAATATGCATGGCTTGTTGCAACACAATACAAATCAACGGAGCTAGCAAAATCCGACTGGGCTGTAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTAATCTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAGGACTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGTTACTCAGTTCCACGCCTTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTTAGTCTGAAAGATAGTGTTGAGAAGGACACTTTCTTCCGCAAGCTTCCAAATTTAGCTGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCTTTGACTGCGTTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTCCGTGTCAAGGTTCTTCCAACAATAATTAAACTCTTTGCCTCCAATGATCGAGCTGTCCGTGTCAGCCTTCTCCAACATATTGATCAATTCGGAGAGTCATTATCAGCTCAAGCTGTTGATGAACAGGTTTACCCTCATGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTATCGAAGTTACAGGTCGATGAAGAGGCAGCGATACGAACAAATACAACTATCTTGCTAGGAAATATTGCAAGCTACTTAAACGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACAGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCTAACTATGACATCAATGAAATTGCCACTCGGATTCTCCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCAAATGGCAAAGCAACACTATGAAAAGTCAAATATAGCAGAGGGTACTGGGGGTGCAGGCGACGGAAGTTCATTAATTCCAGGAAATGCAAGTTTACTTGGGTGGGCTATGAGCTCCTTGACTCTGAAGGGCAAACCTTCTGATCATGCTCCAGTTACTTCTGTGAGTTCTAGTGCCCTTACACCAACATCTTCTAATGCCAGCTCAGGTATTCTAGTTGCAGATACTCCTTCGACAGCACCTATCCGTGTAAATTCCACACCAGATTTCACTGAGCACCATGCCCCTACATCTCCGACATCAACGGATGGCTGGGGGGAGCTAGAGAATGGAATTGACGAGGGACCTGAAAATGACAGGGATGGGTGGGATGATCTAGAACCACTTGAAGAAACAAGGCCAACTCCAGCTCTTACCAACATTCAAGCAGCTCAAAGGCGACCAGTTTCTCAACCTGTTTCACAGACAAGAGCTTCAAGTTCGCGACCCACAATTGCACCAAGGTTGAGCAGGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAACAACAGCAAGACCTTTAAATTTGAATTCGGCTGCAACTAATGATGATGATCCATGGGCTGCCATTGCAGCTCCTGCACCCACTACAAGGGCCAGGCCCTTATCAGCTGGCAGAGGTCGGGGAGCCAGACCCGCTGCTCCAAGATTAGGTGCTCAGCGGATAAACCGGACATCATCCGGGACGTAA	2394	0.4424	MFKFLKDVVGGSGTGLRDLPYNIGEPFPSAWGSWLHHRGTSKDDGSPVSIFSLSGTNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKIKELGLEGTQRDEYYAWGLLQISKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNETSSTQMLQYAWLVATQYKSTELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEDLRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKVLPTIIKLFASNDRAVRVSLLQHIDQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQMAKQHYEKSNIAEGTGGAGDGSSLIPGNASLLGWAMSSLTLKGKPSDHAPVTSVSSSALTPTSSNASSGILVADTPSTAPIRVNSTPDFTEHHAPTSPTSTDGWGELENGIDEGPENDRDGWDDLEPLEETRPTPALTNIQAAQRRPVSQPVSQTRASSSRPTIAPRLSRDEDDDLWGAIAAPAPTTARPLNLNSAATNDDDPWAAIAAPAPTTRARPLSAGRGRGARPAAPRLGAQRINRTSSGT*	798

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal8g3959	797	ProSiteProfiles	Protein kinase domain profile.	2	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal8g3959	797	Gene3D	Phosphorylase Kinase; domain 1	12	107	-	-
	Mal8g3959	797	MobiDBLite	consensus disorder prediction	594	720	-	-
	Mal8g3959	797	Gene3D	Transferase(Phosphotransferase) domain 1	110	279	-	-
	Mal8g3959	797	MobiDBLite	consensus disorder prediction	739	797	-	-
	Mal8g3959	797	ProSiteProfiles	HEAT repeat profile.	366	404	IPR021133	-
	Mal8g3959	797	SMART	serkin_6	37	284	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal8g3959	797	SUPERFAMILY	Protein kinase-like (PK-like)	37	287	IPR011009	-
	Mal8g3959	797	MobiDBLite	consensus disorder prediction	600	655	-	-
	Mal8g3959	797	PANTHER	SCY1-RELATED S/T PROTEIN KINASE-LIKE	1	795	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal8g3959	Mal-Chr8	114478479	114488493	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal8g3959	70	291	MAP Kinase Kinase Kinase	AT5G66850	26.050	3.45e-07	52.0

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	SCY1_SCYL1	Mal8g3959		None	None	None

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal8g3959	K08876		-	gmx:100792884	1295.03

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