Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3948 ATGGCAAATCTTAGCATCTTAAACTCCTTTGTAAAGATTCCAACTATAAAGTTTAAAAAGCTTTTCATCAATGGAGAATTCGTGGACTCAGTTTCAGGAAAAACGTTTGAGACTGTTGATCCAAGAACAGAGGAAGTGATTACAAAAATAGCAGAAGCTACAAAAGAAGATGTTGATATTGCTGTGAATGCTGCTCGTGAAGCATTTGATTTTGGTCCATGGCCACGCATGCCTGGTGCTGAGAGAGCAAAAATCATGGTGAAATGGGCAAGCCTAATTGAACAAAACATAGAAGAAATAGCAGCATTGGATACAATTGATGGAGGGAAACTATACAGTTGGTGTAAAGCTGTAGATGTACCTGAAGCAACCAATATCCTACGTTACTATGCTGGTGCAGCTGATAAAATTCATGGAGAAGTGTTGAAAACTTCTAGGAATTTTCACATGTATACTTTAATGGAACCTATTGGTGTTGTTGGACACATTATACCTTGGAATTTTCCAACTGTTATGTTTTTTGCTAAGGTTGCTCCTTCTTTGGCTGCTGGTTGTACTATGGTTCTTAAACCTGCTGAGCAAACACCTCTCTCATCGCTTTTTTTCGCTCATCTTGCTAAGGAGGCTGGTATACCAGATGGAGTGCTTAATGTACTGCCAGGATTTGGCTTAGAGGCTGGTGCTGCTATAACCTCACATATGGACATAGATGCGGTCAGTTTTACAGGTTCAACTGAAACAGGCCGTCGAGTAATGCAGGCTGCAGCAATGAGCAATTTGAAGCCGGTATCGCTTGAATTAGGAGGCAAGTCACCTCTTTTAGTTTTTGATGATGCTGATGTTGATAAAGCTGTTGATCTTGCTCTATTTGGTATCCTACACAATAAGGGAGAAATATGTGTTGCATGTTCTAGAGTTTTTGTCCAAGAAGGGATTTATGATGAATTTGAGAAGAAAGTGGTGGAAAAGGCGAAAAATTGGGTAGTTGGTGACCCTTTTGATCCTAAAGTTCAACAAGGACCTCAAACTAGTAAGGCACAATTTGATAAAATTCTTTCCTATATTAAACATGGAAAGAATGAAGGAGCCACACTCTTAACTGGTGGTAAGCAAGTGGGAAACAAAGGATACTACATTGAGCCTACTATTTTTGCCAATGTTAAGGATGACATGTTAATAGCACAGGATGAAATATTCGGACCTGTTATGGCACTTTCTAAGTTCAAGACCATTGAGGAAGGGATCAAGAAGGCCAACAATACCAAATATGGCCTAGCAGCAGGGATTGTGACACAAAATTTGGATATTGCAAATACTGTCTCAAGGACAATTCGTGCAGGCATCATTTGGATCAATTGCTACTTTGCCTTTGATGTTGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATTATGGATTGAAAGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTTTGA 1500 0.3933 MANLSILNSFVKIPTIKFKKLFINGEFVDSVSGKTFETVDPRTEEVITKIAEATKEDVDIAVNAAREAFDFGPWPRMPGAERAKIMVKWASLIEQNIEEIAALDTIDGGKLYSWCKAVDVPEATNILRYYAGAADKIHGEVLKTSRNFHMYTLMEPIGVVGHIIPWNFPTVMFFAKVAPSLAAGCTMVLKPAEQTPLSSLFFAHLAKEAGIPDGVLNVLPGFGLEAGAAITSHMDIDAVSFTGSTETGRRVMQAAAMSNLKPVSLELGGKSPLLVFDDADVDKAVDLALFGILHNKGEICVACSRVFVQEGIYDEFEKKVVEKAKNWVVGDPFDPKVQQGPQTSKAQFDKILSYIKHGKNEGATLLTGGKQVGNKGYYIEPTIFANVKDDMLIAQDEIFGPVMALSKFKTIEEGIKKANNTKYGLAAGIVTQNLDIANTVSRTIRAGIIWINCYFAFDVDCPFGGYKMSGFGKDYGLKALHKYLQVKSVATPIYNSPWL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3948 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Mal8g3948 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 499 - -
Mal8g3948 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
Mal8g3948 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Mal8g3948 499 SUPERFAMILY ALDH-like 9 495 IPR016161 GO:0016491
Mal8g3948 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Mal8g3948 499 Pfam Aldehyde dehydrogenase family 27 489 IPR015590 GO:0016491
Mal8g3948 499 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 6 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3948 Mal-Chr8 114180236 114185210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3948 11 499 Aldehyde Dehydrogenase Gene Family AT3G24503 70.612 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3948 K12355 - gmx:100792798 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5236 7 121568670 121576069 Mal8g3948 8 114180236 114185210 PCT