Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3947 ATGACCCAACCTTCTTCCAATGGCAAAACCAATTTCTCCCTAGAAATTCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGAGAATTTGTTAATTCCATTTCAGGAAAAGAATTTGAGACAATCGATCCAAGAAGTGGAGAGGTGATAGCAAAGATTGCAGAAGGAGCAAAGGAAGACATTGATGTTGCTGTGAAAGCGGCACGTGTCGCTTTCGACGATGGTCCATGGCCTCGCATGCCCGGCGCTGCAAGAGCAAAAATCATGCTGAAATGGGCAGACTTAATTGATCAAAACATAGAAGAAATAGCAGCATTAGATACAATAGATGCTGGAAAATTGTACAATTTCTGCAAAGCTGTTGACATTCCTGGAGTAGCAAATACAATACGTTACTATGCTGGTGCTGCTGATAAAATTCACGGCGAGGTTTTAAAACCTGCGCGGGAGTTGCACGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATTATTCCTTGGAATTTTCCTAGTACCATGTTTGCTGCTAAGGTTGCTCCTGCTTTGGCTGCTGGTTGTACAATGCTTCTTAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTTGCTAAGGAGGCTGGAATTCCAAATGGAGTACTCAATGTAGTACCCGGATTTGGTTCAACTGCAGGAGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGTTTTACTGGTTCAACGGAAGTAGGCCGTGAAATAATGATATCGGCAGCTAAAAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGAAAATCGCCCCTCTTAATTTTTGATGATGCTGATATAGATAAAGCTGCTGAGCTTGCTCTCATAGGCATCCTATTTAATAAGGGAGAAATTTGTGTGGCCGGTTCTCGAGTGTTTGTTCAAGAAGGAATATATGATGAATTTGAGAAAAAGTTAGTAGAGAAAGCAAAAGCTTGGGTTGTTGGTGATCCTTTTGATCCTAAAGCTCAGCAAGGGCCTCAGGTTGACAAAAAGCAATTTGAAAAAATTCTTTCTTATATTGAGCATGGAAAGAAAGATGGAGCAACCCTTTTGACAGGTGGTAAAAAAATTGGAGACAAGGGTTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGACATGCTTATAGCACAAGATGAAATATTTGGTCCTGTCATGGCACTCATGAAGTTCAAGACTATTGAAGAAGCAATTAAAAGTGCAAACAATACAAGATATGGCTTAGCAGCAGGAATTGTGACAAAGAATTTGGATATAGCAAACACTGTGTCAAGGTCCATTCGTGCAGGAATTATTTGGATTAATTGCTACTTTGCCTTTGGAAATGACATTCCTTATGGAGGCTACAAGATGAGTGGGTTTGGAAGAGATTTTGGATTGGAATCTTTACATAAGTATTTGCAAGTTAAATCGGTTGTAACTCCCATTTACACTTCTCCTTGGCTTTGA 1506 0.4004 MTQPSSNGKTNFSLEIPTIKFTKLFINGEFVNSISGKEFETIDPRSGEVIAKIAEGAKEDIDVAVKAARVAFDDGPWPRMPGAARAKIMLKWADLIDQNIEEIAALDTIDAGKLYNFCKAVDIPGVANTIRYYAGAADKIHGEVLKPARELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALAAGCTMLLKPAEQTPLSALFYAHLAKEAGIPNGVLNVVPGFGSTAGAAISSHMDIDKVSFTGSTEVGREIMISAAKSNLKPVSLELGGKSPLLIFDDADIDKAAELALIGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKAQQGPQVDKKQFEKILSYIEHGKKDGATLLTGGKKIGDKGYYIEPTIFSNVKDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYTSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3947 501 Pfam Aldehyde dehydrogenase family 32 491 IPR015590 GO:0016491
Mal8g3947 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Mal8g3947 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 489 IPR016162 GO:0016491
Mal8g3947 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Mal8g3947 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 501 - -
Mal8g3947 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 6 501 - -
Mal8g3947 501 SUPERFAMILY ALDH-like 16 495 IPR016161 GO:0016491
Mal8g3947 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3947 Mal-Chr8 114135194 114146156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3947 7 501 Aldehyde Dehydrogenase Gene Family AT3G24503 72.545 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3947 K12355 - gmx:100783920 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5237 7 121578566 121589238 Mal8g3947 8 114135194 114146156 PCT