Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3937 ATGAGGAAAAAACAGCATTATTCTTCTCCATCTTATGTTCTTGTTCTTTTTTCATTCTTTCTAAGTTTATCAACAACAACACTCTCTTCAACCATTATCTCAGATGGGTCCCACCTTACAGAAGCAGAAACACAATACATCAAACATCGACAACTCCTATACTACAGAGATGAATTCAACGACCGAGGTGAAAATGTTACGGTGGATCCAACCCTAGTTTTCTCCAACAACCGCATCAAAAACGCATACGTGGCATTACAAGCTTTAAAACAAGCTATTCTTTCTGATCCACGTAACTGCACCGTTGATTGGGTTGGTTCCAATGTTTGCAACTACACCAATGTTTTCTGTGCACCTGCACTTGATAACCCTAAGATCAATACCGTCGCCGGTATCGATCTTAATCACTGCGATATCGCCGGATACTTACCGGAAGAGCTCGGTCTTTTGACCGATCTCGCTTTATTTCATGTTAATACCAATCGTTTCTGTGGAACAGTTCCACATAAATTTGAGAAGTTGAAGATCTTGTTTGAATTGGATCTGAGTAACAATCGCTTCGCCGGAAAGTTTCCGGAGGTTGTTCTCCGGTTACCGGCGTTGAAGTTTCTAGATCTGAGGTTTAATGAATTTGAAGGAACTGTGCCAAAGGAGTTGTTTGATAAAGATTTGGATGCAATTTTCATCAATCATAACCGTTTTGTTTTTGATTTACCGGAGAATTTTGGTAATTCTCCGGTATCAGTGATTGTACTGGCCAACAACCGTTTTCACGGTTGTTTGCCAGCTGGGATTGGTAATATGACAAATTTAAACGAGATTATTGCGATGAATAATGGTTTTCAATCGTGTTTACCAGAGGAAGTTGGTTTGTTGAAGAATTTGACGGTGTTTGATGTAAGTTTCAACAAGTTTTTGGGGCCGTTGCCAGAGAAGTTTGGGAATGCTGTGAGTTTGGAAGTGTTGAATGTGGCGCATAATTATCTTTCCGGTCAGATTCCGGCGAGTATTTGTGCCTTACCAAATTTAGTGAATTTTACTTACAGTTACAATTTCTTCACCGGTGAACCGCCGCAGTGTTTGGCGTTGCCGGCGGCGCATGATGAAAAGAATTGTTTGCCAGGGAGGCCGAAACAACGGCCGGCGAAGGCGTGTAAGTCGTTTTTGTCTCACCGTGTTGATTGTAACTCTTTTAGATGTAAAGCTTTTGTTCCTTCATTGCCATCACCGCCACCGTCGCCGGTGTTTCCACCTCCAGTTGTTACACCGCCGTCGCCGGTTTTTAATCCACCACCATCACCAGTATTGTCTCCACCACCGCCTTCACCACCATCACCAGTGTTTTCTCCACCACCGCCACCACCACCGGTGTTTTCTCCACCGCCACCACCTCCACCCGTATACTCACCACCCCCACCTCCTCCTTCACCTCCACCACCTTCACCTCCACCACCACCTCCACCAGTGTACTCACCACCTCCACCTCCACCATCACCGCCACCACCTTCACCACCACCACCTCCTCCACCGGTGTATTCCCCACCACCACCTCCACCCTCACCACCACCACCTTCACCACCTCCTCCAGTTTACTTACCACCACCTCCTCCGCCTCCACCACCGCCTCCATCGCCTTCACCAAGTCCTACACCACCATATTGTGTTAGGTCTCCACCGCCAAATTCGCCACCACCACCCCCTCCACCGGCTCCTGTATTCTCCCCACCGCCACCAGTACCTTACTACTATAGCTCACCACCTCCACCACCAGCTCATTCGCCTCCACCACCACCTCATTCGCCACCGCCACCACCTCACTCACCTCCTCCACCTGTTTATCCATATTTATCACCCCCACCACCTCCTCCAGTTCACTCACCTCCACCACCCGTTCACTCACAACCCCCACCATCTCCACCACCTTGTATAGAACCTCCACCACCTCCATCACCCCCACCTTGTGAAGAATATTCACCTCCACCACCACCCCATCAAACACCTTATCTCCCACCACCATCCCCATCACCACCACCAGCACCAGTATATACCTATACCTCACCGCCACCACCGGTATATGCCTCACCACCACCACCGGTATATCCCTCGCCACCACCACCAACACCTGTATATGAAGGGCCATTACCACCAGTTTTCGGAATCTCATATGCATCACCACCACCACCACCCTTTTATTGA 2196 0.4841 MRKKQHYSSPSYVLVLFSFFLSLSTTTLSSTIISDGSHLTEAETQYIKHRQLLYYRDEFNDRGENVTVDPTLVFSNNRIKNAYVALQALKQAILSDPRNCTVDWVGSNVCNYTNVFCAPALDNPKINTVAGIDLNHCDIAGYLPEELGLLTDLALFHVNTNRFCGTVPHKFEKLKILFELDLSNNRFAGKFPEVVLRLPALKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFDLPENFGNSPVSVIVLANNRFHGCLPAGIGNMTNLNEIIAMNNGFQSCLPEEVGLLKNLTVFDVSFNKFLGPLPEKFGNAVSLEVLNVAHNYLSGQIPASICALPNLVNFTYSYNFFTGEPPQCLALPAAHDEKNCLPGRPKQRPAKACKSFLSHRVDCNSFRCKAFVPSLPSPPPSPVFPPPVVTPPSPVFNPPPSPVLSPPPPSPPSPVFSPPPPPPPVFSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPVYLPPPPPPPPPPPSPSPSPTPPYCVRSPPPNSPPPPPPPAPVFSPPPPVPYYYSSPPPPPAHSPPPPPHSPPPPPHSPPPPVYPYLSPPPPPPVHSPPPPVHSQPPPSPPPCIEPPPPPSPPPCEEYSPPPPPHQTPYLPPPSPSPPPAPVYTYTSPPPPVYASPPPPVYPSPPPPTPVYEGPLPPVFGISYASPPPPPFY* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3937 731 MobiDBLite consensus disorder prediction 586 716 - -
Mal8g3937 731 Gene3D Ribonuclease Inhibitor 245 373 IPR032675 -
Mal8g3937 731 PRINTS Proline rich extensin signature 418 434 - -
Mal8g3937 731 PRINTS Proline rich extensin signature 454 475 - -
Mal8g3937 731 PRINTS Proline rich extensin signature 402 414 - -
Mal8g3937 731 PRINTS Proline rich extensin signature 441 453 - -
Mal8g3937 731 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 474 - -
Mal8g3937 731 MobiDBLite consensus disorder prediction 430 570 - -
Mal8g3937 731 Gene3D Ribonuclease Inhibitor 83 244 IPR032675 -
Mal8g3937 731 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 474 - -
Mal8g3937 731 SUPERFAMILY L domain-like 84 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3937 Mal-Chr8 114008436 114010631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3937 39 426 Leucine-rich Repeat extension Gene Families AT3G24480 71.722 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3937 - - mtr:MTR_6g086115 746.503