Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3931 ATGGCGAGTCGGTTTAAAGAAGATGAAAAAAACGAGCGCGCGATTCGAGGTTTGCTTAGGCTTGAACCGAATCGAAGATGCATTAACTGTAATAGTTTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAATTGCAGTGGAATACACCGTGAATTTACACATCGTGTGAAATCAGTTTCAATGGCTAAATTTACTTCGCAAGAAGTTACTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAGAGAGATTTATTTTAAAGAATGGGATGCACAACACAATTCTTTCCCTGACAGCAATAATGTTGCCAGGCTTCGAGAATTTATTAAGCATGTTTATGCGGATAGGAGATTCACCGGAGATAGGGCCTCTGACAAACCACCAAGAGTAAAGGGTGACACAGATGATTCCTATGAAAACAGGAGAGTTGAGGCATATCAGGGAGGATCTAAAAGCCCTCCATATCAAGATACACATGAACGTCGTTATGGTGACAGGTCTGGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAAGTCCCGGTCGTCCTCAAGTTATCAATGATTGGCGTCGTGAAGATCGTAGAATATCAGATGGAGATTATAAGGTGGAAAGCCAATCTCCTGAGCGAGCCAAAGACCTGGGTTCTTCAAGCCCACCCGTGGTCCGACCCGTTCGAGACATTTTGGGAGAAAATGTAGTACCTCTTAGGATAAGTGGACCTCCCAAACCAAACAGTGGAAAAGCTGCCGATGCCTCAGCGCTGACACAGAGAACTGCATCCTCTGGCAGCTTGGTATCCAGTAATGAAAGCCAAGTAGATATTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTGATGCTGATCCTGAGCCTGCTGCTCCAACAATTTCTCAAGCCCAACAAACTACTGTGCCTCAACCTGTTTTGCAGTCAGGAAATTCCAGTGATGACAATTGGGCCTCTTTTGATGTTGTTTCTGAGGCGAAAGCAAATTCAAGCACCTCGAATTTGAATCTGCTTGAATCTGTTTTGTCTCAATTGTCTGTGCCGGAATCTTTACCTTCTCATGCTCCAGGAGTCCAAGGACATATTCCAGCAGCAGCTCTTAGTTTTGGCAGTTTCTCAGCTTTCCCATCCAGTGGTGCTTCGGTGCCATCTGTGTCACCTCCTAATAATGTAGGACAGTGGGCCAGTTTGCAGCATCAGCAACCAACGTTCCCTGCTGGTGTAAATAGTCAGCCATCGCATGTGCCTTCTGTATCCACAGGACAGGGGCATCCAAATGCACCAATGCCACATGCCTTCCAACATCCCTCAAAACCTGCCAATGAGGCTTTTGACAGTGTTGTTCCTCAACCTTCTGCTGTAGAAGTTAAGCCAAGTGGAAGAACAGAACTTCCTGAAGATCTGTTCACTGTAAAACACTCGTCCTTTCCTGCTCCAGGTCAAGGTTGGCAAATGGGTCTTCCCCAGGGCATCTCAATGCAATATCATAATGTGGCGCCTGTGCCAAGTTTTTCGCAGCCATCAAGGTCAACAAATCCATTTGATGTCAGCAGCAAACAAACCCTAGATCAAGCCCCAAGCTTTCCTTCCATGTCGTCCTTCCAAGGTGCGTTGCCTAGTGTATCACCATCACTCCCGATGCACCCTCCAAGCCTCAGCAATCCATTGCATGCATGGAGTCCACCCCTGCCTAATGTAGGCACTATGCACTCATCAACCCTGGGTTATCCACCACATGCATGGTTTCCACCCCTGCCATCCTATCAAGGTGCCCTGCCTAATGTACCGCCTTCAGGCACTATGCACCCTTCAAGCCTGGGCAATCCACCCCATGCCTGGACTCCAACCCCATTGTCATCATATGCATCAGTCCCACCACAAACACAAACTCATGCATCAGCATTGGGACCAGGGTCATACATGGGGCAACAAATGGCAACTAACATACCAGTACTAAGGCAAGGAGTTGGGAATTTTGGAACTGAGGGAGACATTTTCGGCTTGTCAAATCCAGATCAGCAGCTGACTGATAGGCCGTCAACCACTTCCGCATCAAACCCCTTCCCTAAAGGAGGAAACCCATTTGGATAA 2142 0.4673 MASRFKEDEKNERAIRGLLRLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVTALQEGGNQRAREIYFKEWDAQHNSFPDSNNVARLREFIKHVYADRRFTGDRASDKPPRVKGDTDDSYENRRVEAYQGGSKSPPYQDTHERRYGDRSGSGGRSPGYDQESRQYGDYKRSPGRPQVINDWRREDRRISDGDYKVESQSPERAKDLGSSSPPVVRPVRDILGENVVPLRISGPPKPNSGKAADASALTQRTASSGSLVSSNESQVDIKLETTKSLIDFDADPEPAAPTISQAQQTTVPQPVLQSGNSSDDNWASFDVVSEAKANSSTSNLNLLESVLSQLSVPESLPSHAPGVQGHIPAAALSFGSFSAFPSSGASVPSVSPPNNVGQWASLQHQQPTFPAGVNSQPSHVPSVSTGQGHPNAPMPHAFQHPSKPANEAFDSVVPQPSAVEVKPSGRTELPEDLFTVKHSSFPAPGQGWQMGLPQGISMQYHNVAPVPSFSQPSRSTNPFDVSSKQTLDQAPSFPSMSSFQGALPSVSPSLPMHPPSLSNPLHAWSPPLPNVGTMHSSTLGYPPHAWFPPLPSYQGALPNVPPSGTMHPSSLGNPPHAWTPTPLSSYASVPPQTQTHASALGPGSYMGQQMATNIPVLRQGVGNFGTEGDIFGLSNPDQQLTDRPSTTSASNPFPKGGNPFG* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3931 713 MobiDBLite consensus disorder prediction 300 330 - -
Mal8g3931 713 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Mal8g3931 713 CDD ArfGap_AGFG 12 122 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 123 146 - -
Mal8g3931 713 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Mal8g3931 713 PANTHER ARF GTPASE ACTIVATOR 1 580 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 309 330 - -
Mal8g3931 713 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mal8g3931 713 MobiDBLite consensus disorder prediction 680 713 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 519 551 - -
Mal8g3931 713 Pfam Putative GTPase activating protein for Arf 13 123 IPR001164 GO:0005096
Mal8g3931 713 PANTHER ARF GTPASE ACTIVATOR 598 713 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 419 441 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 123 285 - -
Mal8g3931 713 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mal8g3931 713 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mal8g3931 713 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mal8g3931 713 MobiDBLite consensus disorder prediction 198 223 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 684 706 - -
Mal8g3931 713 PANTHER ARFGAP/RECO-RELATED 1 580 IPR044820 GO:0005096
Mal8g3931 713 PANTHER ARFGAP/RECO-RELATED 598 713 IPR044820 GO:0005096
Mal8g3931 713 MobiDBLite consensus disorder prediction 264 285 - -
Mal8g3931 713 MobiDBLite consensus disorder prediction 419 462 - -
Mal8g3931 713 SMART arf_gap_3 12 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3931 Mal-Chr8 113858085 113866212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3931 12 122 C2H2 Transcription Factor Family AT4G05330 35.345 6.64e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3931 - - mtr:MTR_6g086630 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3931 8 113858085 113866212 Mal8g3931 8 113858085 113866212 ECH