Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3928 ATGACTGAAAAGAAAAAGGACTCGAAAAAAGTTTCTGGCCTAGGCAATCAGCCTTCAAAGAAGCAACATCGCAAGGGAGAAAACCCTATTCGATTCGTACCACCTGCTGATCCTCCTGTTGATTACGGACATTCAAACTCATGGATCTGTAAAAACTCCGCTTGTAGAGCAGTTCTATCCAAAGACGACACATTCTGTAGAAGGTGCTCTTGCTGTATTTGCCATCTTTTCGATGATAACAAGGATCCTAGTCTTTGGTTGGTATGCAGTGAATCTTCTCAAGGGGACTCATGTGGATTGTCTTGCCATATCGAATGTGCCCTTCAACATGAAAAAGTTGGAGTTGTTGATCATGGACAGCTGATGCAACTGGACGGCGGTTACTGTTGTGCCTCCTGCGGTAAAGTTACCGGGATACTTGGAAGTTGGAAGAAGCAGCTAAATATAGCGAAAGATGCTCGGCGTGTGGATGTACTATGTTATAGGATATATTTGAGCTACAGGCTTCTGAATGGGACTTTGAGATTTAAAGAATTGCACGACATGGTACAAGAGGCAAAGGCTAAACTGGAGAAGGAAGTTGGTCCTGTTGACGGCGTTTCTTCCAAGATGGTACGCGGCATTGTTAGCAGGCTCCCTGTTGCAAGCGATGTGCAGAAACTCTGTTCCCTTGCTATTGAGAAAGCTGATGAGTGGTTGGCCACTGATGACAATCCAGAATCCAAAGAGGGTTCACTTCCTGCTGCCTGCAAGTTTGTGTTTGAAGAGGTAACAGCTTCCTCAGTCAAAATCATTTTACTTGAAATACCGAATGTAACTTCTGAGGACATTAAGGGATTCAAGCTCTGGTATTACATGACTAGGGGTGAATCACACACACAAGAACCTGTTTGTGTGTTTCCAAAAGATCAGAGGAGGATTTTGATATCCAACCTCCAGCCTTGCACAGAATATACTTTTCGGATCGTATCTTATACAGATATCGGCGACCATGGTCATTCTGAGGCTAAGTGTTTCACCAAAAGCGTTGAGATATTGATAAAGAAACCGACTTCATCAATTGACATGAATACTAAAACGGAGGATACTCAAACTGGAGGAGGCAGTGAATCGGGCTCCAAAATGGAGATCGATCCCAAAATGACTTACCCCGGATTCAAGGTTCGAGACCTTGGAAAGATTTTGCACCTTGCTTGGGCTCAGGAACAAGGCTGCTTTGAGGGCTTTTGCCGCGCCGATACAAAAAATTGCTGTGGTCAAACTGAAATGATCAAGCCTAGCAACCCGGAAGAGCAATCGGTGCCTTTGGTTTCTCGAGACCTTGATCTGAATGTTGTTTCTATGCCTGACTTGAATGAAGAACTCACTCCTCCTTTTGAGTCTTCTCGGGATGAAGACAATGGTTGCACTTTGCAGCAGGCTGTTGAGGCAGATGATGATGCTGCCTCTCATGATTTAGAGAAAAACCTAGCAAGACCACATGGTAGTGGTGGTTCCGAAACCTGGAACCATAGACCTACCGAAGAAGTTCCGGCTGTTGACTCCCGTGTAGTCGTAGGTGCAAGTAGGAAAAGAGTAGCAAGTACGAACGAAGAAGCACATGATTGTGACAGCACCTTAATAAACGGTTCTCCTCTACATGCACCGGATGGTTCGTGCTCCTTAGACGAGAACTTCGAGTATTGTGTTAAAGTAATTCGTTGGCTAGAATGTCAGGGTCATATCAAGAAAGAGTTTAGGCTGAAATTGCTCACATGGTTTAGTTTAAGGGCGACGGAACAAGAGCGTAGGGTGGTTAATACTTTCATTCAGACACTGATCGATGATCCGAGTAGTTTGGCAGGACAACTAGTTGACTCATTTTCTGATATCATATCCAACAAGAGGCCAAGAAATGGATTCAATAATAAGGCTGTGGCATTAAATTAA 1929 0.4417 MTEKKKDSKKVSGLGNQPSKKQHRKGENPIRFVPPADPPVDYGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCSESSQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGSWKKQLNIAKDARRVDVLCYRIYLSYRLLNGTLRFKELHDMVQEAKAKLEKEVGPVDGVSSKMVRGIVSRLPVASDVQKLCSLAIEKADEWLATDDNPESKEGSLPAACKFVFEEVTASSVKIILLEIPNVTSEDIKGFKLWYYMTRGESHTQEPVCVFPKDQRRILISNLQPCTEYTFRIVSYTDIGDHGHSEAKCFTKSVEILIKKPTSSIDMNTKTEDTQTGGGSESGSKMEIDPKMTYPGFKVRDLGKILHLAWAQEQGCFEGFCRADTKNCCGQTEMIKPSNPEEQSVPLVSRDLDLNVVSMPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLEKNLARPHGSGGSETWNHRPTEEVPAVDSRVVVGASRKRVASTNEEAHDCDSTLINGSPLHAPDGSCSLDENFEYCVKVIRWLECQGHIKKEFRLKLLTWFSLRATEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFNNKAVALN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3928 642 ProSiteProfiles Fibronectin type-III domain profile. 246 345 IPR003961 GO:0005515
Mal8g3928 642 SUPERFAMILY Fibronectin type III 253 340 IPR036116 GO:0005515
Mal8g3928 642 Pfam Fibronectin type III domain 252 331 IPR003961 GO:0005515
Mal8g3928 642 Pfam PHD - plant homeodomain finger protein 50 167 IPR032881 -
Mal8g3928 642 Gene3D Immunoglobulins 240 344 IPR013783 -
Mal8g3928 642 PANTHER VIN3-LIKE PROTEIN 1 3 638 - -
Mal8g3928 642 CDD PHD_VIN3_plant 70 133 - -
Mal8g3928 642 MobiDBLite consensus disorder prediction 355 371 - -
Mal8g3928 642 MobiDBLite consensus disorder prediction 1 36 - -
Mal8g3928 642 CDD FN3 251 340 IPR003961 GO:0005515
Mal8g3928 642 MobiDBLite consensus disorder prediction 488 512 - -
Mal8g3928 642 PANTHER VIN3-LIKE PROTEIN 2-RELATED 3 638 IPR044514 GO:0010048|GO:0040029
Mal8g3928 642 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3928 Mal-Chr8 113797540 113801579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3928 46 633 PHD Gene Family AT3G24440 48.926 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3928 - - gsj:114418583 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3928 8 113797540 113801579 Mal8g3928 8 113797540 113801579 ECH
Mal7g5244 7 121651957 121654351 Mal8g3928 8 113797540 113801579 PCT