Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3891 ATGGTTGGTAGGAAGAGTGATAAAGAGAAACTAACTAGTATGTTGCTATCAGATGTTAGCATTGTCAATGATAATATTGGTGTTGTTTCAATTTTTGGCATGGGATGTGTTGGTAAAACAACCCTCGCTCAACTTCTTTACAATGATAAAGAAGTTCAAGGACATTTTGATCTAAAAGCATGGGTTTGTGTGTCAGAGGAGTTTGATCAAAACTTGAAGGACAAAAGATTTCTGTTTGTGTTGGATGACATATGGAATGAGAGCTATAGTGATTGGCATGAGCTACTGACTCCCTTCACTGATGGAAAATCTGGAAGTAGGGTGATTATCACAACGCGTCAGCAAAAAGTTGCCGAGGTCACCCATACATTTCCTATCCATAAATTAGAACCTCTATCAGATGATGACTGTTGGTCATTACTCTCAAAACATGCATTAAGAAGTGAAGACTTTCGTAGCAATAACTACCCAAGCCTAGAAGAAATTGGCAAGAAGATTGCAAAAAAGTGCGGGGGATTGCCAATAGCTGCCAAAACCCTTGGAGGACTTCTACGCTCAAAAGTAGATGCAAAAGAGTGGAGAGCAATTTTAAAGAGTGACATGTGGAATTTTCCAAATGATAATGTTCTTCCTGCTTTGCTTTTGAGTTATCAATATCTTCCTTCTCATTTGAAAAGATGCTTCGCTTATTGTTCAATTTTTCCAAAGGACTATCCTCTTGATAAGAAGCAAATGGTTTTGTTGTGGATGGCAGAAGGATTCCTTGAAGATTCTCAAGGCAAAAGAGCAATGGAGGAAGTAGGGGATGACTACTTTGTTGAACTGCTATCTAGATCATTAATTCAACAGTCGAGTGATGATTTTGGAAGACAAAAGTTTCTCATGCATGATCTTGTCAATGATTTAGCTACAATTGTATCTGGAAAAAGTTGTTGCAGGCGTGAACATGGTGGTAACATCTCTAAAAATGTCCGCCATTTGTCATATAGCCAAGAAGAGTATGATATTTTCAATAAGTTTGAGAGTTTCTATGATTTTAAATGCCTGCGAAGCTTCCTACCTATTGGCATCTGGTCACGACAATGTTACTTATCTAATAAGGTGGTTGATGATTTGATACCCACACTTAGCATGTTGCGTGTGCTATCATTATCATGTTATACAAACGTCACCATGCTACCGGATTCAATTGGCAGTTTGGTGCAGTTGCGGTATTTAGATCTCTCCAACACTAGAATTGAAAGCTTGCCCGATACAACATGTAACCTTTTCAATTTGCAAACATTGATTTTATCATACTGCTATCATCTCATTGAATTGCCGGTACATATTGGTAAGTTAATTAATTTACGTCACCTAAACATTAGTTGGACAAACATGAAGGAGATGCCAATGGAGATTCTTGGATTAGAAAACCTTCAAACTTTAACAACTTTTGTAGCGGGATGGGATGTACTAACTGAAGATTCACAAATTGCGAAAGCTGTGCTTGATGCATTGCAACCATCAATAAACTTGAAAAAACTGAGCATTGACTTCTATGGAGGAACAAGTCTTCCATGTTGGCTCGGAGATTCTTCGTTTTCTAATATAGTGACCCTTTTCATCAGCAATTGTGTATATTGCATAACTCTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGACCATTAGAGGCATGACATTGGAGACAATTGGCGCAGAGTTCTATGGCATGGCGGGAGGTGGTTCCTGTTCAATATTCCAACCATTTCCTTCCTTAGAGATTTTGAAATTTCAGAACATGTCAAATTGGAAGGAATGGCTTCCCTTTGTTAGCAACAAATTTCCTTTTCCTCGCCTTAAATATCTCATGTTAATCCAGTGTCCTAAACTGAGGGGATACTTGCCTAGCCATCTTTCTTCCATAGAACAAATTGGAATGTATGGTTGTGATCTTCTCTTGGCAACACCACCTGCTCTGCAATGGATCTCATCAATAAAAACAATAACGATTGAGGGAGATTTAGATTCTCAAGCGTCTGCTGAAACGATCCAATGGTCGTTGCTTGAGACTGATTCTCCATGTCAGCTGCAGCGTGCATCAATCCGTTGTTGTGATACACTTCTGTCTCTTCCTAAAATGATTCTAAGCAGCACATGTCTCCAACACTTGGAGCTTTACAGTATTCAATATCTCATTGCATTTCCAGCAGATTGTCTACCAACTTCATTGCAATTACTCAGAATTATTGACTGTGAGAATTTAACATTTTTGCCTCCTAATATGTGGAGCAGTTACACATCTCTTATGACATTGGAGTTAGGGAATAGCTGTAATTCACTTACATCCTTTTCATTGGATGGTTTTCCTGCACTACAAAGTCTTTCAATTGATGGTTGTAAGAATCTGGAATCCATTTTTATTTCAGATAGTTCTTCCCTCACAACTCTAGAGTGTTTGACTCTCATAGATCTTCCAAAACTGAAGTTATCATTTGGTGAAGGAGCTTGCCTACCTCCCAAGTTAAGATCATTTCATATTAAATCGGTGCGAATAACAACGCCTGTAACTAAATGGGGTCTCCAACGCCTAACCGCGCTTTCAGATTTGGATATTGGAGGTGATGATATTGTTAACATTTTCTTGAAGGAGAAGTTGCTTCCTATTTCCTTAGTGTCTTTGACAATCACTAATCTCTCTGAAATGAAATCATTCAAAGGAAATGTGTTTCAACATCTTTCCTCTTTGGAAAGCCTTCACTTTCTACATTGTCCAGGACTTGAGTCTTTGCCAGAAGATACATTGCCTTCATCTCTAAAGTTACTGAGCATCAGAAAATGCTCTTTGTTAGAAGCAAGCTATGGAAATCAGAAAGGGAAACATTGGTCCAATATTGCTCATATTCCTGTCATAAAAATAAATGGCCAAGTCATAATATGA 2928 0.3839 MVGRKSDKEKLTSMLLSDVSIVNDNIGVVSIFGMGCVGKTTLAQLLYNDKEVQGHFDLKAWVCVSEEFDQNLKDKRFLFVLDDIWNESYSDWHELLTPFTDGKSGSRVIITTRQQKVAEVTHTFPIHKLEPLSDDDCWSLLSKHALRSEDFRSNNYPSLEEIGKKIAKKCGGLPIAAKTLGGLLRSKVDAKEWRAILKSDMWNFPNDNVLPALLLSYQYLPSHLKRCFAYCSIFPKDYPLDKKQMVLLWMAEGFLEDSQGKRAMEEVGDDYFVELLSRSLIQQSSDDFGRQKFLMHDLVNDLATIVSGKSCCRREHGGNISKNVRHLSYSQEEYDIFNKFESFYDFKCLRSFLPIGIWSRQCYLSNKVVDDLIPTLSMLRVLSLSCYTNVTMLPDSIGSLVQLRYLDLSNTRIESLPDTTCNLFNLQTLILSYCYHLIELPVHIGKLINLRHLNISWTNMKEMPMEILGLENLQTLTTFVAGWDVLTEDSQIAKAVLDALQPSINLKKLSIDFYGGTSLPCWLGDSSFSNIVTLFISNCVYCITLPPLGQLPSLKDLTIRGMTLETIGAEFYGMAGGGSCSIFQPFPSLEILKFQNMSNWKEWLPFVSNKFPFPRLKYLMLIQCPKLRGYLPSHLSSIEQIGMYGCDLLLATPPALQWISSIKTITIEGDLDSQASAETIQWSLLETDSPCQLQRASIRCCDTLLSLPKMILSSTCLQHLELYSIQYLIAFPADCLPTSLQLLRIIDCENLTFLPPNMWSSYTSLMTLELGNSCNSLTSFSLDGFPALQSLSIDGCKNLESIFISDSSSLTTLECLTLIDLPKLKLSFGEGACLPPKLRSFHIKSVRITTPVTKWGLQRLTALSDLDIGGDDIVNIFLKEKLLPISLVSLTITNLSEMKSFKGNVFQHLSSLESLHFLHCPGLESLPEDTLPSSLKLLSIRKCSLLEASYGNQKGKHWSNIAHIPVIKINGQVII* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3891 975 SUPERFAMILY L domain-like 688 947 - -
Mal8g3891 975 PANTHER DISEASE RESISTANCE PROTEIN RP 3 930 IPR044974 GO:0006952
Mal8g3891 975 PRINTS Disease resistance protein signature 398 414 - -
Mal8g3891 975 PRINTS Disease resistance protein signature 28 43 - -
Mal8g3891 975 PRINTS Disease resistance protein signature 170 184 - -
Mal8g3891 975 Gene3D Ribonuclease Inhibitor 680 828 IPR032675 -
Mal8g3891 975 Gene3D - 72 124 IPR027417 -
Mal8g3891 975 Gene3D - 1 71 IPR027417 -
Mal8g3891 975 Gene3D Ribonuclease Inhibitor 359 479 IPR032675 -
Mal8g3891 975 Gene3D Ribonuclease Inhibitor 829 954 IPR032675 -
Mal8g3891 975 Gene3D Ribonuclease Inhibitor 485 646 IPR032675 -
Mal8g3891 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 231 IPR027417 -
Mal8g3891 975 SMART LRR_typ_2 400 423 IPR003591 -
Mal8g3891 975 SMART LRR_typ_2 909 933 IPR003591 -
Mal8g3891 975 SMART LRR_typ_2 447 470 IPR003591 -
Mal8g3891 975 PANTHER OS06G0667900 PROTEIN 3 930 - -
Mal8g3891 975 Gene3D - 216 305 IPR036388 -
Mal8g3891 975 Pfam NB-ARC domain 23 70 IPR002182 GO:0043531
Mal8g3891 975 Pfam NB-ARC domain 71 198 IPR002182 GO:0043531
Mal8g3891 975 SUPERFAMILY L domain-like 295 669 - -
Mal8g3891 975 ProSiteProfiles Leucine-rich repeat profile. 402 423 IPR001611 GO:0005515
Mal8g3891 975 Gene3D - 131 215 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3891 Mal-Chr8 112958605 112961578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3891 388 476 WRKY Transcription Factor Family AT4G12020 38.889 7.51e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3891 - - mtr:MTR_3g032370 1087.4