Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3884 ATGGAGGAAAATCTACCTCCTGGATTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATGCTTCATTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAATAAGTCTGAACCTTGGGACCTCCCAGGTAAGGCTTCAATGGGAGAAAAGGAATGGTACTTTTTTAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACAAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGAGCTCCAAGGGGTGAGAAAAGTAATTGGGTTATGCATGAATATAGACTAGAAAATAAACACCACTTTCGAACTTCAAAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCATAGCAACAAAAAAACCTCAACAAACATCCTCTTCCCAACCAGAATCTCCATGTGACACAACCTCACTAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCATCATGTGGATTCACCAACATTATTTCAGGACAAACATTCAACACTCATGATCTTTCTAATGTTAACACAAATATGAATTTGGCAATGAATTGGCCATCTTCAAGTGAAGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCTGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACAACAAAGAGAAGTTGCAGCTACAAATATTCATTTTGCACCATATATGCCTCAACAAGGAGTAATATCTCATCACCTTGGAACTGAACCAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAATGTATGCCACATCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA 981 0.3649 MEENLPPGFRFHPTDEELITHYLTMKISDASFTSKAVAVVDLNKSEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSIATKKPQQTSSSQPESPCDTTSLVNEFGDVELPNLNGITNSSSSCGFTNIISGQTFNTHDLSNVNTNMNLAMNWPSSSEVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQQQREVAATNIHFAPYMPQQGVISHHLGTEPSNNSNDLSASSSKVLECMPHHQQEQPFNLDSIW* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3884 326 ProSiteProfiles NAC domain profile. 5 151 IPR003441 GO:0003677|GO:0006355
Mal8g3884 326 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 262 - -
Mal8g3884 326 Gene3D NAC domain 14 154 IPR036093 GO:0003677|GO:0006355
Mal8g3884 326 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Mal8g3884 326 MobiDBLite consensus disorder prediction 285 305 - -
Mal8g3884 326 PANTHER BNACNNG63190D PROTEIN 2 262 - -
Mal8g3884 326 MobiDBLite consensus disorder prediction 287 305 - -
Mal8g3884 326 SUPERFAMILY NAC domain 3 151 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3884 Mal-Chr8 112822856 112825485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3884 1 326 NAC Transcription Factor Family AT3G18400 57.895 9.96e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal8g3884 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3884 - - gmx:100780030 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3884 8 112822856 112825485 Mal8g3884 8 112822856 112825485 ECH