Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3860 ATGTCGTTCTTCTCCAGGCTATGTTCATGCTTGCAGACGTGCATGAAGAAGCACGGCACAGCCTCCGAAGACGGCGGAGATGATGATAAAGACACGGTGGATGCTGGTGATTCTTGTAATCTGTTGTTTGAGCTGAATACTCTTCAGCTTGCTACTAATTTCTTCTCTGAGCTTAATCAGCTTGGTCGTGGTGGCTTTGGTCCTGTTTTTAAGGGTTTGATGCCAAATGGTGAAGAAGTAGCTATTAAAAAGCTGTCATTGGAATCTAGACAAGGAGTTAGAGAATTTACCAACGAAGTTAGGCTATTGCTAAGAATTCAGCACAAGAATTTAGTGACTTTACTAGGTTGTTGTGCAGAAGGACCCGAGAAAATGCTTGTGTATGAGTATCTACCAAACAAAAGCCTTGATCACTTTCTATTTGATAAAAAGAGATCTTTGGATTGGATGACACGATTTCGAATAGTTACCGGTATTGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCGGAAAGAATTATTCATAGAGACATTAAAGCTAGTAACATATTGCTTGACGAGAAATTAAATCCGAAAATTGCAGACTTTGGTTTGGCAAGGTTGTTTCCTGGAGAGGACACTCATGTGCAGACATTTAGGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGCGGATATCTTTCTGTAAAGACCGATGTTTTCAGTTATGGAGTGTTGGTGTTGGAAATAGTTAGCGGGAGAAAAAACCATGATGTCAAGCTTGATGCAGAAAAGGCAGATCTCCTAAGCTATGCATGGAAACTTTATCAAGGAGGGAAGATTATGGATTTAATAGACCAAAGCATTGGTAAATACAATGGTGATGAGGCTGCAATGTGCATTCAGCTAGGTTTATTATGCTGTCAAGCAAGTGTAGTAGAAAGACCTGATATGAATTCAGTTAATCTTATGCTATCAAGTGATTCATTCACTTTGCCAAGACCAAGTAGACCAGGAATTCAAGGTCGTGTAAGAAAATGGAATACAACTACAAGTTCTGCTTTGACTAATAATACTAATGGTAGTAGTGCAACAAGAGCCTCAGGTGGTAGTAGTTTTGTAGAAGATTATTCTAGAAATTCTATCTCTACTTCTTCTTTTGATGAAGGTAGATAG 1170 0.3974 MSFFSRLCSCLQTCMKKHGTASEDGGDDDKDTVDAGDSCNLLFELNTLQLATNFFSELNQLGRGGFGPVFKGLMPNGEEVAIKKLSLESRQGVREFTNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKKRSLDWMTRFRIVTGIARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKIADFGLARLFPGEDTHVQTFRISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNHDVKLDAEKADLLSYAWKLYQGGKIMDLIDQSIGKYNGDEAAMCIQLGLLCCQASVVERPDMNSVNLMLSSDSFTLPRPSRPGIQGRVRKWNTTTSSALTNNTNGSSATRASGGSSFVEDYSRNSISTSSFDEGR* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3860 389 SUPERFAMILY Protein kinase-like (PK-like) 43 343 IPR011009 -
Mal8g3860 389 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Mal8g3860 389 SMART serkin_6 55 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3860 389 Pfam Protein tyrosine and serine/threonine kinase 58 255 IPR001245 GO:0004672|GO:0006468
Mal8g3860 389 ProSiteProfiles Protein kinase domain profile. 55 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3860 389 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 387 - -
Mal8g3860 389 CDD STKc_IRAK 61 323 - -
Mal8g3860 389 MobiDBLite consensus disorder prediction 346 389 - -
Mal8g3860 389 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 387 - -
Mal8g3860 389 Gene3D Phosphorylase Kinase; domain 1 20 130 - -
Mal8g3860 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3860 Mal-Chr8 112339914 112344549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3860 40 338 Receptor kinase-like Gene Family AT4G21410 54.098 5.09e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal8g3860 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3860 - - aprc:113868075 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3860 8 112339914 112344549 Mal8g3860 8 112339914 112344549 ECH