Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3852 ATGGCTACTAAAAGGTTTTTTGATGATTCCGATGATCAAGATAAAGACAATCCAAACGACAAACGAATGAGACCTACTAGACCTTCTTTAGCTTCTGTAATAGAAAGAGCAGTTAAAGTGCAAAATTTGCAGAACCTTTTAGGAGCTTTGGAACCTTTTCTTAAAAGAGTGGTGAGTGAAGAGGTGGATAGAGCAATGGGAAAGTGCTTTCCATCTTCCATCAATAGGTCACCTTCATTAAGAATCCAAGCACCAAAGGATCAACAATCAACCTTACAATTCTCATTCAACAAAAGACTTTCCCTCCCAATTTTCACAGGTAGTAGAATACTTGACATAGATGGTAATCCTATCAACATAATTCTTGTTGACAAAACCAACAATAATCAAATTGTTCCAACAAGTCTTCCTTACCCTATAAAGCTAGAGATTGTGGTACTTGATGGAGATTTTCCACTTGATGAAAAAGAGAATTGGACTAGTGAAGAATTCAATAGATACATAGTGAAGGAAAGAAGTGGGAAGAGACCATTGCTTTCAGGAGAATTGATCCTTACTATGAGAGGTGGAATTGCACCAATTGGGGACATAGAATTCACAGATAATTCTAGTTGGATAAGGAGTAGGAAATTTAGAGTTGCAGTTAAGGTGAGTCATGGGAGTAATCAAAGTGTTAGGATTCAAGAAGGCATGACTGAGGCATTTGTTGTAAAAGATCATCGTGGAGAATTGTACAAAAAGCACCACCCACCAATGCTTGGGGATGATGTGTGGCGCCTAGAGAAGATAGGGAAAGATGGAGCTTTCCACCAAAAAATGATGGCTAAGGGGATCAAAACAGTGCAAGACTTTCTTAAATTAGCAGTTATTGATACTCCAAAGCTAAGAGAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGAAAGTCACAATAAAGCATGCAATGACTTGTGACATGGGGAGCAAGATCTATATATATCGTGGACCTCAATTTATTATTTTTCTGAATCCAATATGCAAATTAATTAAAGCTAATATCAATGGACAAGAATTTTCCTGCAGAGACTACATGAGCCAAATGAATAAGAGCTATATAGACAAATTGGTTGGAGAAGCATACTCAAAATGGCATGAGTTGGAGGAAATTGATGGGGTTTTAAATGATAACATTGCTTTGTTAACCCAAGGTGACCAAACTGTGGAGCAGTATCCAAACAATAATCCAGCAACAGTAGCAACAACTTATAATCAGAATGAATACTATGGTGACAGATCTATAGACAATATTGCTAGCTATTTACCAAGCAATAATGCACAAATGGCTAGTGGTGAGTGGTTATTGAATCAAGCCTATACCACAACACCAAATGCAAATGGATTCCCTTTTGGCTTCTCAGGCCCACAATCAAATGGGGACATGACACCTTCAGGTTCTGGCCTTAGGGACATTAATGGGGCCACAAGGCAACTTTAG 1476 0.3814 MATKRFFDDSDDQDKDNPNDKRMRPTRPSLASVIERAVKVQNLQNLLGALEPFLKRVVSEEVDRAMGKCFPSSINRSPSLRIQAPKDQQSTLQFSFNKRLSLPIFTGSRILDIDGNPINIILVDKTNNNQIVPTSLPYPIKLEIVVLDGDFPLDEKENWTSEEFNRYIVKERSGKRPLLSGELILTMRGGIAPIGDIEFTDNSSWIRSRKFRVAVKVSHGSNQSVRIQEGMTEAFVVKDHRGELYKKHHPPMLGDDVWRLEKIGKDGAFHQKMMAKGIKTVQDFLKLAVIDTPKLREILGIGMSDKMWKVTIKHAMTCDMGSKIYIYRGPQFIIFLNPICKLIKANINGQEFSCRDYMSQMNKSYIDKLVGEAYSKWHELEEIDGVLNDNIALLTQGDQTVEQYPNNNPATVATTYNQNEYYGDRSIDNIASYLPSNNAQMASGEWLLNQAYTTTPNANGFPFGFSGPQSNGDMTPSGSGLRDINGATRQL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3852 491 PANTHER OS02G0177800 PROTEIN 1 482 IPR012416 GO:0005516
Mal8g3852 491 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Mal8g3852 491 MobiDBLite consensus disorder prediction 469 491 - -
Mal8g3852 491 Pfam Calmodulin binding protein-like N-terminal domain 92 240 IPR046831 -
Mal8g3852 491 Pfam Calmodulin binding protein C-terminal domain 323 383 IPR046829 -
Mal8g3852 491 MobiDBLite consensus disorder prediction 1 28 - -
Mal8g3852 491 MobiDBLite consensus disorder prediction 1 23 - -
Mal8g3852 491 PANTHER PROTEIN, PUTATIVE-RELATED 1 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3852 Mal-Chr8 112182406 112187646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3852 3 385 Calmodulin-binding Proteins AT5G57580 48.586 2.17e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3852 - - gmx:100803213 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3852 8 112182406 112187646 Mal8g3852 8 112182406 112187646 ECH