Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3850 ATGATTTCTACTACTATAGAAGGTAAGGAGTTGAGCTGGCAAAGGAAAATGAAAATCATTCTAGGAAGTGCAAGTGCAACATTTGTAGGACTATCGACATGTATCACCATCTTTTATTTCACATACAAGTTCATAAAGAATAACCAAGACATCACAAGTCAAAACAAAAAGAATAACCAAAACATCGAAGCATTCTTAAAAACTCATGAAGCTTTTACTATAAGAAGATACAAATTCTCGCATATCAAGAAAATGACCAACAACTTCGAAGTCAAACTAGGACAAGGTGGTTATGGTGTTGTATATAAAGGAAAGCTACTTAACGACCGCCTTGTGGCTGTAAAGATATTGAATGCATCCAAAGGAAAAGGTGAAGAATTTATGAATGAGGTTTCTAGCATCACCAAAACCTCTCACATAAATGTTGTTGCACTTCTTGGATTTTGTTTTCACGGTCACAAAAAAGCTTTGATCTATGAATTCATGTCCAATGGTTCGCTTGACAAATTTATTTACAACACGCAACCTGAACACAATCAATCTCTGAGTTGGGAGATTCTTTATCAAATTGCTAAAGGGATAGCTCGAGGGTTGGAGTACCTACATAGGGGATGTAGCACTCGAATTTTACATTTTGATATAAAACCACATAATATTTTATTAGATGAGAATTTTTGTCCGAAGATATCAGATTTTGGACTTGCAAGGCTTTGTCCCAAGAAAGAAAGCATTATTTCGATGTCAGGTGCTAGAGGAACAATGGGATATGTAGCTCCTGAGTTATGGAATAGAAATTTTGGAGGCGTTTCTTACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATGGTTGGAGGAAGGAAAAACATTAACGCTAATGCAAGTCATTCAAGTGAGATATACTTTCCTCATTGGGTATACAAGAGGTTTGATCTAGGCACTGATTTGAGACCCGACGAAGTGATTGCCATAGAAGATGAGATTGCGAAGAGAATGACAATTGTAGGATTATGGTGCATTCAATCACTTCCAAATGATAGACCTACAATGAGTAGAGTGATTGAAATGTTAGAAGGCAACATGAATTCATTGGAAATACCACCAAAACCTATTCTTTCTTCTCCTACTAGATCAGTACCAAAATCATCAGCTTCGTGA 1164 0.3625 MISTTIEGKELSWQRKMKIILGSASATFVGLSTCITIFYFTYKFIKNNQDITSQNKKNNQNIEAFLKTHEAFTIRRYKFSHIKKMTNNFEVKLGQGGYGVVYKGKLLNDRLVAVKILNASKGKGEEFMNEVSSITKTSHINVVALLGFCFHGHKKALIYEFMSNGSLDKFIYNTQPEHNQSLSWEILYQIAKGIARGLEYLHRGCSTRILHFDIKPHNILLDENFCPKISDFGLARLCPKKESIISMSGARGTMGYVAPELWNRNFGGVSYKSDVYSYGMMLLEMVGGRKNINANASHSSEIYFPHWVYKRFDLGTDLRPDEVIAIEDEIAKRMTIVGLWCIQSLPNDRPTMSRVIEMLEGNMNSLEIPPKPILSSPTRSVPKSSAS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3850 387 MobiDBLite consensus disorder prediction 368 387 - -
Mal8g3850 387 ProSiteProfiles Protein kinase domain profile. 87 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3850 387 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 387 - -
Mal8g3850 387 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Mal8g3850 387 Gene3D Transferase(Phosphotransferase) domain 1 162 373 - -
Mal8g3850 387 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 387 IPR045874 GO:0004672
Mal8g3850 387 SUPERFAMILY Protein kinase-like (PK-like) 67 360 IPR011009 -
Mal8g3850 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Mal8g3850 387 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Mal8g3850 387 Pfam Protein tyrosine and serine/threonine kinase 90 359 IPR001245 GO:0004672|GO:0006468
Mal8g3850 387 CDD STKc_IRAK 93 361 - -
Mal8g3850 387 SMART serkin_6 87 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3850 Mal-Chr8 112146131 112148899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3850 12 384 Receptor kinase-like Gene Family AT5G38280 51.323 7.07e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal8g3850 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3850 - - gmx:102665158 525.398