Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3845 ATGTCTAAGCAGTTTTTCCTTCTTGACAAGGTGTTGATATTTTGTGTTCTAGCACTAGCCTCAGCTCAAAGTGCCAACAATGTGAATGCTACATATCGCTCGTTCAATTCTCCAACTAAACAGAATATGGGAAACAAGTGGAACTTGAACACATCTGGTGTATTATGTGCAGCTCAAGATGGAAACAAATCATTGTCATGGCGAAGCAAATATGATTGGGCTGCCTTCTGTGGACCTGTTGGTCCTGTTGGCAAAGCTGCTTGTGGCAAGTGCTTAAAGGTGACGAATAGAGATGGTGGGAATTCGGTAACACAACAACAATCAATTCCGGCCATCCAAACAGTAAGAATTGTTGATCAGTGTAGCAATGGAGGGCTTGATTTGGATATTGATGTCTTTCAAATGCTTGACACTTCTGGGGATGGGAATGCTCAAGGTTACCTCATGGTGGATTATGAATTTATGGATTGTGAGCCTACCCTTGCTGCTACTTCTGATTGCAGCACAAAAGGTGGAAAATGTGACAATATCACAAAAGGGTCGCAGGGATCGGTATTCTTTAATGCCACCGCTAATGCCACTGTTTGCAGTAATGGCACACATTGTCACAAGGCCACTAACCATAGATCAATTACTTTATCTCCGACACCATCACCAACATCAATACCAACATTCTTATCGCCTAGTCCTTTCTCAGATTTCCCTCTACAATTTTCTCCACTTGGTAGTCGCTCTAATTGGATAAGGAATATCATTATAGGTGTTGGAAGTGCAGTTATGGCTGCATTGTTAATGTCCATCATTATCTTCTGTTGTCTAAGAAGCAAATCATCAATACGGCAAGGAAAATTTCGGTTTAGAACTAAGAATGATACAAATATTGAAGCATTTTTAAAAGATCATGGAGCTCTATTGCAGAAAAGATATAAATTTTCAGAAATAAAGAAAATGACAAACTCATTCAAGGTTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTACAAAGGAAAGTTATTCAATGGTTCTCTTGTGGCAGTGAAGATATTAAATGCATCAAAAGGAAACGGCGAAGAATTTATTAATGAGGTTGCTAGTATTACTAGAACCTCACATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTTGAAGGCACAAAAAAAGCACTCATATATGAATTTATGCCCAATGGTTCTCTTGACAAATTTATTTACAATAAGGGACCTGAAACAATTGCATCTTTGAGTTGGGATAATTTGTATCAAATTGCAAAAGGGATAGCTCGTGGACTAGAGTACTTGCATAGAGGATGTACCACTCGGATTTTACATTTTGACATAAAACCGCATAACATTCTCTTAGATGAGAATTTATGTCCGAAGATTTCAGATTTTGGACTTGCAAAGCTATGTCCAAAGAAAGAGAGCATTATTTCGATGTCAGATCAAAGAGGGACAATGGGATATGTAGCTCCAGAAGTGTGGAATCGACATTTTGGAGGAGTTTCACACAAGTCCGATGTTTATAGTTATGGAATGATGATGTTGGAAATGGTTGGAGGGAGGAAAAACATTAATGCTGAAGCAAGTCACACAAGTGAGATATACTTTCCTCATTGGGTATACAATAGACTTGAGATTGGTAGTAATTTGAGACCTGATGGAGTTATGGATTCAGAAGAAGATGATATTGCAAGGAGAATGACCATTGTGGGTTTATGGTGCATTCAAACATTTCCAAGTGATAGACCTACAATGAGTAAAGTGATTGAAATGTTAGAAGTTAACATGAATTCACTCGAAATACCACCAAAACCATTGCATTCTTCTCCTACTAGATCAGTATCAGAGTCTGCTACGTCTTAA 1863 0.3833 MSKQFFLLDKVLIFCVLALASAQSANNVNATYRSFNSPTKQNMGNKWNLNTSGVLCAAQDGNKSLSWRSKYDWAAFCGPVGPVGKAACGKCLKVTNRDGGNSVTQQQSIPAIQTVRIVDQCSNGGLDLDIDVFQMLDTSGDGNAQGYLMVDYEFMDCEPTLAATSDCSTKGGKCDNITKGSQGSVFFNATANATVCSNGTHCHKATNHRSITLSPTPSPTSIPTFLSPSPFSDFPLQFSPLGSRSNWIRNIIIGVGSAVMAALLMSIIIFCCLRSKSSIRQGKFRFRTKNDTNIEAFLKDHGALLQKRYKFSEIKKMTNSFKVKLGQGGFGVVYKGKLFNGSLVAVKILNASKGNGEEFINEVASITRTSHVNVVTLLGFCFEGTKKALIYEFMPNGSLDKFIYNKGPETIASLSWDNLYQIAKGIARGLEYLHRGCTTRILHFDIKPHNILLDENLCPKISDFGLAKLCPKKESIISMSDQRGTMGYVAPEVWNRHFGGVSHKSDVYSYGMMMLEMVGGRKNINAEASHTSEIYFPHWVYNRLEIGSNLRPDGVMDSEEDDIARRMTIVGLWCIQTFPSDRPTMSKVIEMLEVNMNSLEIPPKPLHSSPTRSVSESATS* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3845 620 ProSiteProfiles Protein kinase domain profile. 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3845 620 Gene3D - 23 158 IPR036908 -
Mal8g3845 620 PRINTS Barwin domain signature 63 81 IPR001153 GO:0042742|GO:0050832
Mal8g3845 620 PRINTS Barwin domain signature 82 100 IPR001153 GO:0042742|GO:0050832
Mal8g3845 620 CDD STKc_IRAK 325 593 - -
Mal8g3845 620 Pfam Barwin family 24 157 IPR001153 GO:0042742|GO:0050832
Mal8g3845 620 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Mal8g3845 620 SUPERFAMILY Protein kinase-like (PK-like) 306 594 IPR011009 -
Mal8g3845 620 Pfam Protein kinase domain 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3845 620 ProSitePatterns Barwin domain signature 1. 88 96 IPR018226 GO:0042742|GO:0050832
Mal8g3845 620 SUPERFAMILY Barwin-like endoglucanases 39 158 IPR036908 -
Mal8g3845 620 ProSiteProfiles Barwin domain profile. 23 159 IPR001153 GO:0042742|GO:0050832
Mal8g3845 620 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3845 620 MobiDBLite consensus disorder prediction 602 620 - -
Mal8g3845 620 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 248 620 - -
Mal8g3845 620 MobiDBLite consensus disorder prediction 600 620 - -
Mal8g3845 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 248 620 IPR045874 GO:0004672
Mal8g3845 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Mal8g3845 620 Gene3D Transferase(Phosphotransferase) domain 1 394 601 - -
Mal8g3845 620 Gene3D Phosphorylase Kinase; domain 1 280 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3845 Mal-Chr8 111990321 112002776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3845 219 606 Receptor kinase-like Gene Family AT4G18250 53.015 6.65e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal8g3845 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3845 - - gmx:102665158 598.971