Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3844 ATGAAGCAAGTTTTCCTATTGGATACGGTGTTAATATTTTGTGTTCTTCTAGCACTAGCATCTGCTCAAAGAGCTAACAACGTGAAGGCTACATATCAATCATACAATGCTCAGAAAATTCAATGGAACTTGAACACATCAGGTGTATTCTGTGCAGCTCAAGATGGAAACAAATCATTGTCATGGCGTAGTGAATATGGTTGGACTGCCTTCTGTGGACCTGTTGGGCCTGTTGGCACAGCTGCTTGTGGCAAGTGCTTAAATGTGACAAACAAAGAAAATGGGAATATGGTCTCTAAAACAGTAAGAATTGTTGATACATGCACCAACGGAGGGCTTGAGTTAGATATTGATGTGTTTCAAAAGCTGGATAGCTCTGGGACCAGAAATCCTCAAGGTTACCTTATGGTGGATTATGAATTTGTGGATTGTGATTGCTACACAAAAGGTGGAAATTGTGGCTACATCTCAACAGAGACGCGGCGACTGGCAATTGATGTATCTTCAAAAAACAAAAAGTCATACACAACAGTATCAACCAAAAGTTCTTATTTAAAAAAAACCCAAAGTTCTAGAGCCGTAAATTGCGGATTATTTGGTGGCACCAGTTCATGTATAAGTAGTTCTCCGCAGCGGTCGCAGCAGCGGCATTTGACACCACCGCCGCCAACCCCGCCAGCACCCCAGCCACCACCACCACCACCGCCGACCCCGCCAACAATCATATCACCTAGTCCTTTGTCAACTAGACCTAAAGCGCCACCTCCAACACCACCGCTGCCTTCGACGCCGCCAGCACCCCCGCCGCTGACTCAGACCCAAAAACCAACATTCATATCGCCTAGTCCTTTGTCAACTAGACCTAAAGTTGCACCAAAACAAACACCAACATTCTTATCGCCAAGTCCTTTGTCAAATTCCACTCTACAATTTCATCGTACTACAACTGGTAGCGACAATAATTGGAAAAGAACGGTCGCTATAGGGTTTGGAAGTGCAACAATTGTAGCATTGTTGGTGTGCATCATAATTTGTTATATTAGAGGCAAATTATTGATACAACGAGTAAAACTCCGGTTTAGAGCAAAGAATGATAAAAATATTGAAGCATTTTTAAAAGATCATAAAGCCCTATTGCAAAAAAGATATAAATTTTCAGAAATAAAGAGAATGACAAACTCATTCAAGGTTAAACTTGGTCAAGGGGGTTTTGGTGTTGTGTACAAAGGAAAGTTACTCAATGGCTGTCTAGTGGCTGTAAAGATATTGAATGCATGTAAAAGAAATGGTGAAGAATTTATTAATGAGGTTGCTAGTATTACTAGAACCTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGTTATGACGGCCATAAAAAAGCTCTTGTATACGAGTTTATGTCCAATGGTTCTCTTGATAAATTTATTTACAATAAGGGATCTGAAACTATCGCATCTTTAAGTTGGGATAGTTTGCATCAAATTGCGAAAGGGATAGCTCGTGGGCTAGAGTACTTGCATAGAGGATGTACCACTCGGATTTTACATTTTGACATAAAACCACATAACATTCTATTGGATGAGAATTTTTGTCCAAAAATATCAGACTTTGGACTTGCAAAGCTTTGCCTTAGGAAAGAGAGCATTGTTTCGATGTCGGATCAAAGAGGGACAATGGGGTATGTAGCTCCAGAAGTGTGGAATAGACATTTTGGAGGAGTTTCATATAAGTCTGATGTTTATAGTTATGGAATGATGTTGTTAGAAATGGTGGGTGGGAGAAAAAACGTTAATGTTGATGCAAGTCATACAAGTGAAATATACTATCCTCATTGGGTATACAGTAGGCTTGAGCTTGGTGGTGATTTAAGATCTGAAGGAATAATGGATACCGAAGAAGATGAGATTGCAAGAAGAATGACCATTGTAGGTTTGTGGTGTATTCAAACATTTCCTAAAGATAGACCTACAATGAGTAAAGTGATCGAAATGTTAGAAGTTTCGATGAATTCATTGGAAATACCACCAAAACCATTGCATTCATCTCCTACTAGATCAGTATCAGATTCTTTTACATCTTAA 2085 0.3962 MKQVFLLDTVLIFCVLLALASAQRANNVKATYQSYNAQKIQWNLNTSGVFCAAQDGNKSLSWRSEYGWTAFCGPVGPVGTAACGKCLNVTNKENGNMVSKTVRIVDTCTNGGLELDIDVFQKLDSSGTRNPQGYLMVDYEFVDCDCYTKGGNCGYISTETRRLAIDVSSKNKKSYTTVSTKSSYLKKTQSSRAVNCGLFGGTSSCISSSPQRSQQRHLTPPPPTPPAPQPPPPPPPTPPTIISPSPLSTRPKAPPPTPPLPSTPPAPPPLTQTQKPTFISPSPLSTRPKVAPKQTPTFLSPSPLSNSTLQFHRTTTGSDNNWKRTVAIGFGSATIVALLVCIIICYIRGKLLIQRVKLRFRAKNDKNIEAFLKDHKALLQKRYKFSEIKRMTNSFKVKLGQGGFGVVYKGKLLNGCLVAVKILNACKRNGEEFINEVASITRTSHVNVVTLLGFCYDGHKKALVYEFMSNGSLDKFIYNKGSETIASLSWDSLHQIAKGIARGLEYLHRGCTTRILHFDIKPHNILLDENFCPKISDFGLAKLCLRKESIVSMSDQRGTMGYVAPEVWNRHFGGVSYKSDVYSYGMMLLEMVGGRKNVNVDASHTSEIYYPHWVYSRLELGGDLRSEGIMDTEEDEIARRMTIVGLWCIQTFPKDRPTMSKVIEMLEVSMNSLEIPPKPLHSSPTRSVSDSFTS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3844 694 Gene3D - 23 145 IPR036908 -
Mal8g3844 694 Gene3D Phosphorylase Kinase; domain 1 354 467 - -
Mal8g3844 694 PANTHER RUST RESISTANCE KINASE LR10-RELATED 320 694 IPR045874 GO:0004672
Mal8g3844 694 ProSitePatterns Barwin domain signature 2. 137 144 IPR018226 GO:0042742|GO:0050832
Mal8g3844 694 MobiDBLite consensus disorder prediction 216 274 - -
Mal8g3844 694 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 320 694 - -
Mal8g3844 694 SUPERFAMILY Barwin-like endoglucanases 24 145 IPR036908 -
Mal8g3844 694 ProSiteProfiles Barwin domain profile. 23 146 IPR001153 GO:0042742|GO:0050832
Mal8g3844 694 Pfam Protein kinase domain 396 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3844 694 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Mal8g3844 694 PRINTS Barwin domain signature 77 95 IPR001153 GO:0042742|GO:0050832
Mal8g3844 694 PRINTS Barwin domain signature 119 143 IPR001153 GO:0042742|GO:0050832
Mal8g3844 694 PRINTS Barwin domain signature 58 76 IPR001153 GO:0042742|GO:0050832
Mal8g3844 694 MobiDBLite consensus disorder prediction 275 316 - -
Mal8g3844 694 Gene3D Transferase(Phosphotransferase) domain 1 468 675 - -
Mal8g3844 694 ProSitePatterns Barwin domain signature 1. 83 91 IPR018226 GO:0042742|GO:0050832
Mal8g3844 694 Pfam Barwin family 25 144 IPR001153 GO:0042742|GO:0050832
Mal8g3844 694 SUPERFAMILY Protein kinase-like (PK-like) 379 668 IPR011009 -
Mal8g3844 694 SMART serkin_6 393 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3844 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Mal8g3844 694 MobiDBLite consensus disorder prediction 205 316 - -
Mal8g3844 694 ProSiteProfiles Protein kinase domain profile. 393 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3844 Mal-Chr8 111903840 111951087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3844 328 680 Receptor kinase-like Gene Family AT4G18250 53.039 4.15e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mal8g3844 Pkinase 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3844 - - gmx:100799268 593.578