Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3843 ATGACGCAAGCCCGAAAGGCGGGATTTACTATCACGATAGGTAGATCAAACGTCACAACCGGCCCTCCATATGTACAATTTAATTGTGAAAGGGGCGGTTCATATGATAAAAGAAGTGGGAAGAGTTTGAAGCGCGAGGGCACCGGTTCTAGAAAATGTCATTGTCCGTTTCGGTTGAGAGGTTACATTCACCTTCCGGGCTACAATTGGTATATTATCCCCACTTGTGGAATCCACAACCACGAGATGGAGCCAAAGTTGGAAGGTCACCTACATGCCGGTAGACTCACCGGAAATTCAAAGAAGGTTGTCCAAGAATTGACAAAGAGTTTGGTGAAACCGAAACATATTTTGATTAATTTGAAACAAAAAGATGAAGAAAATGAGACAAACATAAAGCAAGTTTACAATGCTCGGCATAGATTTAGACTTGAGCAAAGAGGTAATTCCTCGGAGTTGCAACATTTGGTAAAAAAGTTGGAGGAGCACCAATATGTTCATTTCACACGAACAAAGAGTGATGAGACAAAAGTTCTCCAAGATATTTTTTGGGCTCATCCGAAATCTATTATGTTGCTCAACACTTTTCCAACCGTGTTGATTATGGACTCCACGTATAAGACCAATAGGTATAAATTGCCTTTGTTTGAGATGGTTGGTGTGACATCCACTTACTTAACATACTCTGTTGGTTTTGCTTTTTTGGCTAATGAAAAAAAAAGACAACTTCATTTGGGTTCTAGAAAAGGTGCGTGGTCTTCTTCAATCAAAGGCCAATACGCCTAA 786 0.4033 MTQARKAGFTITIGRSNVTTGPPYVQFNCERGGSYDKRSGKSLKREGTGSRKCHCPFRLRGYIHLPGYNWYIIPTCGIHNHEMEPKLEGHLHAGRLTGNSKKVVQELTKSLVKPKHILINLKQKDEENETNIKQVYNARHRFRLEQRGNSSELQHLVKKLEEHQYVHFTRTKSDETKVLQDIFWAHPKSIMLLNTFPTVLIMDSTYKTNRYKLPLFEMVGVTSTYLTYSVGFAFLANEKKRQLHLGSRKGAWSSSIKGQYA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3843 261 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 241 IPR031052 GO:0006355
Mal8g3843 261 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 42 241 - -
Mal8g3843 261 Pfam MULE transposase domain 199 242 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3843 Mal-Chr8 111888010 111888795 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal8g3843 MULE 4.3e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3843 - - mtr:MTR_4g119600 235.728