Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3836 ATGTCTATTCCTTTTTCTTTCACCATCAACACATTTTTCTTCCTCACACTTCTTTTTTTAATCCAAATCCAAACATACATAGTTACCGCTGATGAAATGTACACATCTTGTGCACCTTTCAGCTGTGGTAACTTCACAGCGATCACATATCCTTTTTGGAGTCAAAACAGTCAACCTAACTACTGTGGCCACCCAAAGTTCAAGCTTGATTGCCAAAATGGCAGCTTGACTTTGGACATCAAGTCCCGAAAGTTTCACATCCTTCATATGAATCGAACATCTCAAGTTTTGACTATTGCGAGGGAAGACTTATATGATGCTTCTACTTCTACTTCATGTCCCTTCCAATATACTGATGTAGATATAGATTTGAACTTCTTCCACTACACTTCCAATAATGCCAATTATACTCTATTGTTTGAGTGTGGTCCTCCTCCTGATCCAACTTCTTCTCCGGTGATTTCTGAACTCTCTGAAGAGACGATGTGCTTCAAAGAGGGTAGTTATCAATTTGCGTACTTAGTTTTAAGCACTATGGTTGGGGATTTTGATGTTCTCAAGTGTAAGAGAAAGGTCTTTGTTCCTGGCCTAAATACTTCATTCACAAGCAAGTTTGTTTTAGAGAAAGGATTTGAGCTTGGGTGGAGTGGTGTGGGAGAAGACATATGCGATGGTTGCATAAAATCTGGTGAGAGATGTGGATTCAACACATCTAAAAATGTAGCTATCTGTCTCTCCCCAAAGAAATCTGCATCACCATCAGTTCCAGTAGCACCAACAACATCAAATGGTGTTGTTTCGGCTGTGTTAGGAACTCTTGCTGTGATGTCAGCAATATATATCTATTACCGCCGATACAACAATAGTTCTGCAGAGTCTCGTATACAATCTCTCAGCCTCACATCTCGACATGGAAGTCAGAGAAGTGGAATGCGTGAACTTAGAGTTAAGCGTTTCACTTTTAGTGAGCTTGAACAGGCAACCAACAACTTTGACTCTGCAAATATGCTCGGAGATGGGGCCTCTGGGACAGTGTATTTTGGAAATTTGTCTGATGGCCGTAGTATTGCTGTAAAGAAGTTTAATGATTATGATGACAGAAAAGAGGATCATTTTTGGAATGAAGTTAGCAACCTGGGTCAACTTAACCACCCCTCTGTTGTGTCATTATATGGATCCACTTCATGGCAAGACCAAGAACTTCTCATTGTATACGAGTATGCTCGCAATGGAACTGTGGCAGATCACCTTCATGATGATGAAGCAAAACGTGCAAATCTTACTTGGAACATGAGAATGAATATTGTTGTGCAGACAGCAAGTGCACTGAAGTATCTTCATGCTAATAGCATCATACACAGTGACATAAAAACCAGCAATATTCTTTTGGATGCCAACTTTAATGCCAAAGTGGCAGATTTTGGACTCTCACGCCCTTTACCAAATGGTCATAGCCATCTTTCAACAAGACCACATGGGACTCCAGGTTATGTAGCTCCTGAGTACAGACAGATCAACCAGGTTAATCCTAAATGTGATGTCTACAGCTTTGGAGTAGTCATGATTGAGCTGATATCAGCTTTGAAAGCTTATGATCAGGAAAGGCCCGGGGTTGATGAGAATCTGTCTAACTTGGCTATAAAAAAAATTAAAAGTCAAGAATTGGATACACTTGTGGATCACACCTTAGGTTTTGATTCAGATCCCAGTGTAAATGAAATGATAAGGGGTGTTGCTGGTTTAGCATGTATGTGTATGCACAGTTCCCCAAATATGAGACCTTCCATGAATGAAGTGCTCATATCTCTAGAAGATATTAGGAGTGCTGGTGCAAATGAAATCCAACCAGAGGGAACGGACAATGAAGAAATCGTGCTGCTAAATCAAGATCTACCTCCACCGACTACAATCAATTAG 1917 0.4043 MSIPFSFTINTFFFLTLLFLIQIQTYIVTADEMYTSCAPFSCGNFTAITYPFWSQNSQPNYCGHPKFKLDCQNGSLTLDIKSRKFHILHMNRTSQVLTIAREDLYDASTSTSCPFQYTDVDIDLNFFHYTSNNANYTLLFECGPPPDPTSSPVISELSEETMCFKEGSYQFAYLVLSTMVGDFDVLKCKRKVFVPGLNTSFTSKFVLEKGFELGWSGVGEDICDGCIKSGERCGFNTSKNVAICLSPKKSASPSVPVAPTTSNGVVSAVLGTLAVMSAIYIYYRRYNNSSAESRIQSLSLTSRHGSQRSGMRELRVKRFTFSELEQATNNFDSANMLGDGASGTVYFGNLSDGRSIAVKKFNDYDDRKEDHFWNEVSNLGQLNHPSVVSLYGSTSWQDQELLIVYEYARNGTVADHLHDDEAKRANLTWNMRMNIVVQTASALKYLHANSIIHSDIKTSNILLDANFNAKVADFGLSRPLPNGHSHLSTRPHGTPGYVAPEYRQINQVNPKCDVYSFGVVMIELISALKAYDQERPGVDENLSNLAIKKIKSQELDTLVDHTLGFDSDPSVNEMIRGVAGLACMCMHSSPNMRPSMNEVLISLEDIRSAGANEIQPEGTDNEEIVLLNQDLPPPTTIN* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3836 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 632 IPR044652 -
Mal8g3836 638 SUPERFAMILY Protein kinase-like (PK-like) 306 603 IPR011009 -
Mal8g3836 638 Pfam Wall-associated receptor kinase C-terminal 187 247 IPR032872 -
Mal8g3836 638 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3836 638 SMART serkin_6 331 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3836 638 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Mal8g3836 638 Pfam Protein kinase domain 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3836 638 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Mal8g3836 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Mal8g3836 638 Gene3D Transferase(Phosphotransferase) domain 1 409 629 - -
Mal8g3836 638 Gene3D Phosphorylase Kinase; domain 1 302 407 - -
Mal8g3836 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 12 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3836 Mal-Chr8 111602569 111604841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3836 264 633 Receptor kinase-like Gene Family AT1G25390 43.548 6.67e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g3836 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3836 - - gmx:100800873 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal8g3836 8 111602569 111604841 Mal8g3836 8 111602569 111604841 ECH