Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3820 ATGGAAAATCATATTCCTATGCTCGTGAATATCACATACATCTCTTTCTTCTTCTTCTTAGTAATAATAATCACCACTTTTTTCCCTCATCAATCCCACTCTCAATCACTCAACGATTATTCCACTTGTAAAGACATCAAAATCTCCTACAACTGCCACAAAAACATCACTACCATTCTAATATCCTCACAAAATTTCACAGTACTTGATATCAACACCGAAAAACACACCATGAAACTCAAAAGAACAGACCTTTCTCAAAATCTTTGTTCTCCTCAATTTAATGATACTTATTTGTCTCCAACTCTGTTTCAATATCTTCCAAGTGTCAACAACATAACCATATTCTACAATTGTACTCCCTCTCCTAATTCACCTAAAAAATCTCTATGTGAATCTCCGAATCATGCTTTCTATATTGTTGGTGATGAATTGGAAGAACCAATTAATTGCAAGAGACATATTCAAGTGCCAGTAGGAGCAGATTTTCATTTTCCTAAAGAGAATGATTATGATGGTTATTTTGACCATGATGCTGTTCAAAGTGGTTTGGATAAGGGGTTTGAGGTGAAGTATAGTGTGAATGAGGAATGTTTGAAATGTTTAGGAAGGGATGAAGGAGATTGTTCGAGTGAATATATTGAAAACTGTTCTTCTCATCACAACAGCCCGTTGAATTGGGAGAGGAAACTCGGTATTGCTGTTGCTTCTGCTGTGTTAGGAGGGCTTGCAGTGTTTGCAGCCATATATTTCTATAAGCGCCGAAAAAATAAAAGTTATGCAAAGTCATATGTACAGTCTCACAACCTCTCTTCTGATCCATCTTCAAAGGATCTTGAGAGGGGAAGTCAACACTTTGGAGGAAGTCAAAACTTTGGAGTGCAACATTTTACTTATAGTGAGCTTGAAGAAGCCACGAACTACTTTGATCCGTCTAAAGAACTTGGAGAAGGAGGCTTTGGGACAGTGTATTTTGGCAAACTGCATGATGGGCGAAGTGTTGCGGTGAAGAGGTTATATGAGAACAACTACAGAAGAGTTGAGCAATTCATGAATGAAGTTAAGATCCTAGCTAGATTAGTCCATCCGAATCTTGTGTCACTATATGGATGCACTTCACGCCATAGTCGCGAACTTCTACTTGTCTACGAGTACGTCTCTAATGGAACTGTCGCTGACCATCTTCATGGTAAACAAGCAAAACATGGAAAACTCACTTGGAATGTTCGAATGAATATCGCTGTGGAGACGGCTAGTGCATTGAAGTATCTTCATGTTTCCGACATCATTCACAGAGATATAAAAACCAATAATATTCTTCTTGACGCTCATTTTCGTGTAAAAGTAGCCGATTTTGGACTCTCGCGCCTTTTTCCAAATGATCAAACTCATGTTTCAACTGCTCCACAAGGGACTCCAGGTTATGTGGATCCTGACTACCATGAGTGCTATCAACTTACCGATAAAAGTGATGTCTATAGCTTTGGAGTTGTGTTGATCGAGTTGATATCATCTTTGCCTGCTGTCGATATCACAAGGCATAGACATGAAATCAATTTGGCCAACATGGCTATCAACAGAATTCAAAATCAAAAACTGCATGAGCTTGTGGATCCTACCCTTGGTTTTGAATCAGATTCCAAAGTAAAGAAAATGATAAATGCTTTGGCTGAGTTAGCATTTCAATGTTTGCAAAGTTCGAAAGATATGCGACCTAGTATGGACGAAGTTTTGGAAACTTTAAAGGATATTCAAAGTGATGGTAAACATAGAAGCCAACCTGAGGTAAGCAGTTGA 1797 0.3834 MENHIPMLVNITYISFFFFLVIIITTFFPHQSHSQSLNDYSTCKDIKISYNCHKNITTILISSQNFTVLDINTEKHTMKLKRTDLSQNLCSPQFNDTYLSPTLFQYLPSVNNITIFYNCTPSPNSPKKSLCESPNHAFYIVGDELEEPINCKRHIQVPVGADFHFPKENDYDGYFDHDAVQSGLDKGFEVKYSVNEECLKCLGRDEGDCSSEYIENCSSHHNSPLNWERKLGIAVASAVLGGLAVFAAIYFYKRRKNKSYAKSYVQSHNLSSDPSSKDLERGSQHFGGSQNFGVQHFTYSELEEATNYFDPSKELGEGGFGTVYFGKLHDGRSVAVKRLYENNYRRVEQFMNEVKILARLVHPNLVSLYGCTSRHSRELLLVYEYVSNGTVADHLHGKQAKHGKLTWNVRMNIAVETASALKYLHVSDIIHRDIKTNNILLDAHFRVKVADFGLSRLFPNDQTHVSTAPQGTPGYVDPDYHECYQLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLANMAINRIQNQKLHELVDPTLGFESDSKVKKMINALAELAFQCLQSSKDMRPSMDEVLETLKDIQSDGKHRSQPEVSS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3820 598 Gene3D Transferase(Phosphotransferase) domain 1 386 595 - -
Mal8g3820 598 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 39 593 - -
Mal8g3820 598 Gene3D Phosphorylase Kinase; domain 1 283 385 - -
Mal8g3820 598 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Mal8g3820 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Mal8g3820 598 SMART serkin_6 309 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3820 598 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Mal8g3820 598 MobiDBLite consensus disorder prediction 268 289 - -
Mal8g3820 598 Pfam Protein kinase domain 312 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3820 598 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 39 593 IPR044652 -
Mal8g3820 598 ProSiteProfiles Protein kinase domain profile. 309 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3820 Mal-Chr8 110952942 110959690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3820 182 587 Receptor kinase-like Gene Family AT1G25390 55.904 2.60e-149 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g3820 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3820 - - cam:101492618 710.679