Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3819 ATGGGGTGGGATCTCTGTATGTGCTGCTGCTTCATTAGCACTTCTGAAACATATCAAAAGCAGAGTGAATTGAAGTGGCAAATCTTCTCCTATGAGCAACTTAGAAAAGCCACAAATTATTTTGATCAAGCTCACATTCTTGATAAGAAAGGCTCTGCCACTGTATATTATGGAAAACTTAAGAATGGTCGTGAGATTGCAGTCCAATGCTTTAACGAAGACAAGTACAACATATTGAAACAGTTCATCAATGAAATTGCATTCCTAAAATACATGCCACACAAAAACCTTGTTACGATTTATGGATGTGCCACTCATCAAAAGGATTCCTTGCTAGTACACGAATACCTGTGCAATGGGACTCTTGCTGCTCATATTAAAGGTCGAATATCAGATAGTGGAACAACATTAACTTGGCTTAACAGATTGGATATTGCAATTGATATAGCAAATGCATTAGACTATCTTCACTATAACGGCATTGTGCACCGTAATGTAAAGTCTCACAATATTTTCCTTGATATAAACTTTCGTGCTAAAGTTGGTAACTTTCATCTGTCAAAGAAACTTGATGTTGGAGCAACCCATGTTACAAGAGACATAGTCGGATCAAGTAGTTATGTAGACCCAGAACTTGTATCAAAAGGCTTACTTGGTGTCCAAAACGATGTTTATAGCTTTGGCGTGGTGTTGTGTGAGCTTGTGTCATCTATACTTGCAGAATATTATATTCATAATGAAGAAGAATGTCTAGCAAGCCTTTTATGCGCAAAAGTTGAAAACCAAGCTTTAGTGGAGCTGTTGGATCGAAGACTTGGCTTCGAATCAGACCTTAAGATCAACAAGATGATGACCGCAACGGCTGAGCTTGCATGTTGGTGTTTGAAATGCCCACAAGAATTAAGGCCTAACATGGAACAAGTGCTAGAGACTCTCAATGGCATAAAGCAAGAGAGATATGAGGTAAACCCAATAAAAGCTTTCAAAATCTTCAACCATATAGAACTTGAAGAAGCTACTAACCATTTTGATACTTTTCTGGGATCTGGAGGGTTCGGCAGAGTCTACTATGGAAAACTTAAAGACGGTAGAGAGGTTGCGATAAAACGCTTCCATGAAGAGACAGAAAAATCCAATAAGCAATTCATGAAAGAGATTGAGATCTTAGGTCACTTGTATCATCAAAATCTGGTTTCACTTTATGGCTACAGTTCTCGTCGTAACAACAAGCACATGCTAGTGTACGAGTACATCTCTAATGGAACTCTTACACAGCATCTTCACGGATCTTCAGGTAGTAAACTATCATGGCCTACTAGATTGAATATTGCCATTGAAACTGCGAAAGCCTTGGTATATCTTCACGACTCAGGTATCATCCATCGTGACATAAAAGGAAGCAATATTCTGCTTGATGAAAATTTTAATGTTAAAGTTGCAGATTTTGGACTCTCGCGGTTTCTTCCAGACTACGTTACCCATTTTTCAACTTTTCCGGTAGGAACTCGTGCTTACATTGATCCAGATTACTATAAAACTGGGAGGGTCAGTGACAAAAGTGATGTATTTAGCTTTGGTGTGATCTTATTTGAGCTTATATCATCAAAACCCGCAAATTTAATGCAAGGCAGTACTGACTGTGTCAGTGTCAATCTTCTCTGCGAATTTGCAAGGAGTAAAATCTTAAACAGAGAATTGGATCTGTTAATCGATCGAAGTCTTTCAATCTCTTTTAGTGAAAATATAGTGGAAATGATAACAGCAGTGACAGAGTTGGCATTTCAGTGTGTGCAGTGTCCCAAGAAACTCAGGCCAACCATGAAACAGGTGTTAGATACTCTACAGGGCATAAGCCAAGGGAAATGGAGATTCAACCAAATAACATAA 1887 0.3853 MGWDLCMCCCFISTSETYQKQSELKWQIFSYEQLRKATNYFDQAHILDKKGSATVYYGKLKNGREIAVQCFNEDKYNILKQFINEIAFLKYMPHKNLVTIYGCATHQKDSLLVHEYLCNGTLAAHIKGRISDSGTTLTWLNRLDIAIDIANALDYLHYNGIVHRNVKSHNIFLDINFRAKVGNFHLSKKLDVGATHVTRDIVGSSSYVDPELVSKGLLGVQNDVYSFGVVLCELVSSILAEYYIHNEEECLASLLCAKVENQALVELLDRRLGFESDLKINKMMTATAELACWCLKCPQELRPNMEQVLETLNGIKQERYEVNPIKAFKIFNHIELEEATNHFDTFLGSGGFGRVYYGKLKDGREVAIKRFHEETEKSNKQFMKEIEILGHLYHQNLVSLYGYSSRRNNKHMLVYEYISNGTLTQHLHGSSGSKLSWPTRLNIAIETAKALVYLHDSGIIHRDIKGSNILLDENFNVKVADFGLSRFLPDYVTHFSTFPVGTRAYIDPDYYKTGRVSDKSDVFSFGVILFELISSKPANLMQGSTDCVSVNLLCEFARSKILNRELDLLIDRSLSISFSENIVEMITAVTELAFQCVQCPKKLRPTMKQVLDTLQGISQGKWRFNQIT* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3819 628 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Mal8g3819 628 CDD STKc_IRAK 347 617 - -
Mal8g3819 628 Gene3D Phosphorylase Kinase; domain 1 329 417 - -
Mal8g3819 628 SMART serkin_6 341 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3819 628 SMART serkin_6 41 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3819 628 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Mal8g3819 628 Pfam Protein tyrosine and serine/threonine kinase 343 612 IPR001245 GO:0004672|GO:0006468
Mal8g3819 628 Pfam Protein tyrosine and serine/threonine kinase 53 311 IPR001245 GO:0004672|GO:0006468
Mal8g3819 628 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 628 - -
Mal8g3819 628 Gene3D Phosphorylase Kinase; domain 1 14 116 - -
Mal8g3819 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Mal8g3819 628 SUPERFAMILY Protein kinase-like (PK-like) 324 618 IPR011009 -
Mal8g3819 628 Gene3D Transferase(Phosphotransferase) domain 1 117 328 - -
Mal8g3819 628 Gene3D Transferase(Phosphotransferase) domain 1 418 626 - -
Mal8g3819 628 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 628 IPR044652 -
Mal8g3819 628 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3819 628 ProSiteProfiles Protein kinase domain profile. 41 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3819 Mal-Chr8 110942423 110945180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3819 330 617 Receptor kinase-like Gene Family AT1G25390 54.949 1.44e-96 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g3819 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3819 - - gmx:100801413 859.366