Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3818 ATGGGGTGGGATATCTGTATGTGCTTCTGCTTCACTAGCACTTCTGAAACATTTCCAAAGCAGAGTAAATTGAAGTGGCAAATCTTCTCCTATGAGCAACTTAGAAAAGCCACAAATTATTTTGGTCAAGCCATTCTTGATAAGAAAGGCTCTGCCGCTGTATATTATGACAAGTACAACATATTGAAACAGTTCATCAATGAAACTGCATCCCTAAATTACATGCCACACAAAAACTTTGTTACAATTTATGGATGTGCCACTCATCAAAAGGAATCCTTGCTAGTACACGAATACATGTCCAATGGGACTCTTGCTGCTCATATTAAAGGCCGAATATCAGATAGTGGAACCACATTAACTTGGCTTAACCGATTGGATATTGCAATTGATATAGCAAATGGATTGGACTATCTTCACTATAATGGCATTGTGCACCGTAATGTAAAGTCTCACAATATTTTCCTTGACCTAAACTTTTGCGCTAAAGTTGGTAACTTTCATCTGTCAAAGAAACTTGATGTTGGAGCAACCCATGTTACAAGAGACTTAATCGGAACAAGTGGTTATGTGGACCCAGAACTTGTGTCAAAAGGCTTAATTGGTGTCCAAAATGATGTTTATAGCTTTGGTGTGGTGTTGTGTGAGCTTGTGTCATCTATGCTTGCAGAATATTATGTTCAAAATGAAGAAGAAAGTCTAGCTACACTCTTGTGCACAAAAGTTGAAAACCAAACTTTGGTTGAGCTGTTGGATCCAAGACTTGGATTCCAATCAGACCTTAAGATCAACAAGATGATGACCGCAACGGCTGAGCTTGCATTTTGGTGTTTGAAATGCCCACAAGAATTAAGGCCTAACATGGAACAAGTGCTAGAGACTCTCAATGGCATAAAGCAAGGGAGATATGAGATAAACCCAATAAAAGCTTTCAATATCTTCCACTGTATCGAACTTGAAGAAGCTACTAACCATTTTGATACTTTTCTGGGATCTGGAGGGTTCGGCAGAGTCTACTATGGAAAACTTAAAGACGGTAGAGAGGTTGCAATAAAACGTTTCCATGAAGAGACAGAAAAAACCATTAAGCAATTCATGAAAGAAATTGAGATCTTAAGTCACCTGCATCATCAAAATCTGGTTTCACTTTATGGCTGCAGTTCTCGTCATAGCAACAAGCACATGCTAGTGTACGAGTACATCTCTAATGGAACTCTTACACAGCATCTTCACGGATCTTCAGGTAGTAAACTATCATGGCCTACTAGATTGAATATTGCCATTGAAACTGCGAAAGCCTTGGTATATCTTCACGACTCAGGTATCATCCATCGTGACATAAAAGGAAGCAATATTCTGCTTGATGAAAATTTTAATGTTAAAGTTGCAGATTTTGGACTCTCGCGGTTTCTTCCAGACTATGTTACCCATGTTTCAACTTTTCCGGTAGGAACTCGTGCTTACATTGATCCAGATTACTATAAAACTGGGAGGGTCAGTGACAAAAAATTGGATCTGCTAATCGATCGAAGCCTTTCAATTTCTTTTAATGAAAATATAGTGGAAATGATAACAGCAGTGGCAGAGTTGGCATTTCAGTGTGTGCAGTGTCCGAAGGAACTCAGGCCAACCATGAAACAAGTGTTAGAGACTCTTCAGGGCATAAGCAAAGGGAAATGGGGATTCAACCAAATAACATAG 1701 0.3904 MGWDICMCFCFTSTSETFPKQSKLKWQIFSYEQLRKATNYFGQAILDKKGSAAVYYDKYNILKQFINETASLNYMPHKNFVTIYGCATHQKESLLVHEYMSNGTLAAHIKGRISDSGTTLTWLNRLDIAIDIANGLDYLHYNGIVHRNVKSHNIFLDLNFCAKVGNFHLSKKLDVGATHVTRDLIGTSGYVDPELVSKGLIGVQNDVYSFGVVLCELVSSMLAEYYVQNEEESLATLLCTKVENQTLVELLDPRLGFQSDLKINKMMTATAELAFWCLKCPQELRPNMEQVLETLNGIKQGRYEINPIKAFNIFHCIELEEATNHFDTFLGSGGFGRVYYGKLKDGREVAIKRFHEETEKTIKQFMKEIEILSHLHHQNLVSLYGCSSRHSNKHMLVYEYISNGTLTQHLHGSSGSKLSWPTRLNIAIETAKALVYLHDSGIIHRDIKGSNILLDENFNVKVADFGLSRFLPDYVTHVSTFPVGTRAYIDPDYYKTGRVSDKKLDLLIDRSLSISFNENIVEMITAVAELAFQCVQCPKELRPTMKQVLETLQGISKGKWGFNQIT* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3818 566 ProSiteProfiles Protein kinase domain profile. 324 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3818 566 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Mal8g3818 566 Pfam Protein tyrosine and serine/threonine kinase 62 239 IPR001245 GO:0004672|GO:0006468
Mal8g3818 566 Pfam Protein tyrosine and serine/threonine kinase 326 471 IPR001245 GO:0004672|GO:0006468
Mal8g3818 566 PANTHER TYROSINE KINASE FAMILY PROTEIN 502 566 - -
Mal8g3818 566 SMART serkin_6 31 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3818 566 SMART serkin_6 324 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3818 566 ProSiteProfiles Protein kinase domain profile. 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3818 566 Gene3D Transferase(Phosphotransferase) domain 1 401 559 - -
Mal8g3818 566 Gene3D Transferase(Phosphotransferase) domain 1 104 309 - -
Mal8g3818 566 PANTHER TYROSINE KINASE FAMILY PROTEIN 21 502 - -
Mal8g3818 566 Gene3D Phosphorylase Kinase; domain 1 310 400 - -
Mal8g3818 566 SUPERFAMILY Protein kinase-like (PK-like) 37 303 IPR011009 -
Mal8g3818 566 Gene3D Phosphorylase Kinase; domain 1 44 103 - -
Mal8g3818 566 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 502 566 IPR044652 -
Mal8g3818 566 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 502 IPR044652 -
Mal8g3818 566 SUPERFAMILY Protein kinase-like (PK-like) 308 555 IPR011009 -
Mal8g3818 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3818 Mal-Chr8 110936837 110939705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3818 313 555 Receptor kinase-like Gene Family AT1G25390 49.655 5.04e-83 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g3818 PK_Tyr_Ser-Thr 2.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3818 - - gmx:100801413 770.385