Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3813 ATGCCAATTTTCTCTTTTTTAAGTCAATGTTTTTCCCCTAGTGGAACTAGAAAGAAAAATGACCCTTCACTTTCAAAGGGTTTTATGGAGAAGGGTTTTGAGGAGAAGCGTGGAAATTTGGTGGCCGTGAGTTCAGAGAACCCAATCAGAAATGATCAAATGGTGTCTGTGGATTCTAAGGTTACAAGCAAATGTAATGATACAGTGCCTATGAATGTGATTTCTGAGTTACCAGTTAGTAATGGTGATCGATCAATATTGATTGATTCTGAGGCGGAGAATAACCAATGCAACATTAGTGAGAGTGAAATCTTCAAGTATTCTGAACTTGAAGAAGCTACCAACAACTTTGACAGTAGTAGAATACTTGGGAGTGGAGGCTATGGAACAGTTTATTCTGGAACACTTAAAGATGGGCGTCTTGTCGCAATAAAGCGCTTACATGAAGACAAGTTCAAGATCTTAAGGTTGCATGATAATAAGCTAGATGAGGAAACATTAAGAAAGTTCATCAATGAAGTTTCAATGTTAACTCGCATGAGGCACGAAAATCTTGTCCAACTGTATGGTTGCACCTCTCCTCAGACACGCGAACTACTTCTCGTGCAAGAATACGTTCCAAATGGAACTGTATCTCGTCGTCTCCATAAACACACCTTCCCGTGGTCTACTCGACTAAACGTCGCATTACAAACTGCAAGTGCACTAGCTTATCTTCATGCTTCCAATATCATCCACCGTGATGTGAAAACCAGTAATATTCTGCTTGACATCAGTTTGAATGCTAAAGTTGCAGACTTTAGATTGTCGGTCCTTGTCCCGCACGGTGCTACTCACGTTACAACCGATCCTGCGGGAACACCAGGTTATATTGATCCGGAGTATTACGAACATTGTCACCTTTCGGATAAAAGCGATGTTTACAGCTTCGGAGTGATATTGGTTGAGTTGATTTCATCTTTGCCTGCATTTAGCGAGGATGAAAAACAACCTTTTCTTTCGGATTTCGCTATGGATAAAATCCTTAATGGAGAACTCGAAAAACTTGTCGACCCGAATCTTGGATTTCAATCAGACAATTGGATAAGTGAAACGGTAGGTGCAGTGGCAGAGTTGGCATTTGGCTGTTTACAACCTCATAGAGACATGAGACCTTCCATGAGTGAGGTTGTGAATACTCTTGAGAGCATAAAATGTGGAAGCTCTCAAAAAGCTCTTAAATGGGGTTCAAATAATTGTTATAATGCTACCAAAGTTCACATTGTTCCACGTTTGCCTGATGATTATTTTGAGAAGAAATAG 1302 0.4025 MPIFSFLSQCFSPSGTRKKNDPSLSKGFMEKGFEEKRGNLVAVSSENPIRNDQMVSVDSKVTSKCNDTVPMNVISELPVSNGDRSILIDSEAENNQCNISESEIFKYSELEEATNNFDSSRILGSGGYGTVYSGTLKDGRLVAIKRLHEDKFKILRLHDNKLDEETLRKFINEVSMLTRMRHENLVQLYGCTSPQTRELLLVQEYVPNGTVSRRLHKHTFPWSTRLNVALQTASALAYLHASNIIHRDVKTSNILLDISLNAKVADFRLSVLVPHGATHVTTDPAGTPGYIDPEYYEHCHLSDKSDVYSFGVILVELISSLPAFSEDEKQPFLSDFAMDKILNGELEKLVDPNLGFQSDNWISETVGAVAELAFGCLQPHRDMRPSMSEVVNTLESIKCGSSQKALKWGSNNCYNATKVHIVPRLPDDYFEKK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3813 433 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Mal8g3813 433 Gene3D Phosphorylase Kinase; domain 1 87 205 - -
Mal8g3813 433 Gene3D Transferase(Phosphotransferase) domain 1 206 416 - -
Mal8g3813 433 SUPERFAMILY Protein kinase-like (PK-like) 99 395 IPR011009 -
Mal8g3813 433 ProSiteProfiles Protein kinase domain profile. 117 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3813 433 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 91 403 IPR044652 -
Mal8g3813 433 SMART serkin_6 117 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3813 433 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 91 403 - -
Mal8g3813 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Mal8g3813 433 Pfam Protein kinase domain 119 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3813 Mal-Chr8 110636859 110639105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3813 104 398 Receptor kinase-like Gene Family AT1G25390 53.135 4.77e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal8g3813 Pkinase 5.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3813 - - mtr:MTR_6g082700 739.184