Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3780 ATGGTGAATGCAATAAAAGCAGCAATTGGAGATTTCGTATTGACTTTCATATGGATGTTTATATCTTCAACACTTGGATTAGTCACAACAGAAATTATGAAAGCTTTTGATCTACAATTTGTGACTTATAATGGTGTTAATTATCCTTTTATTATAATCACAACATGTCTTATATTCTTAATTATATTTACTTTTACTGCTATTGGTAATGCTATGGGAGGTGCAAGTTTCAACCCTACAGGAAATGCTTCTTTCTATGCTGCTGGTCTTGGTTCTGATACACTTATCTCTATGGCTCTTCGTTTCCCTGCTCAGGCGTTAGGAGCAGTTGGTGGTGCTATGGCAATTAAGGAAGTAATACCACCAAAATATAGTCACATGATTGGAGGACCTGGTTTGAAGGTTGATGTGCATACTGGAGCTATTGCAGAAGGAGTGTTGACATTTGTAATCACTTTTGCTGTTCTCTTCATCGTGCTCAGAGGGCCTCGTAGTGAGTTCATGAAGACTTTGTTATTGGCCATGTCAACCGTATCTATGATTCTCGCCGGTTCTGCGTACACCGGACCATCAATGAATCCAATCCTTGCATATGGTTGGGCATACTTAGACAACTGGCACCACTCATGGGATCAATTCTATGTTTACTGGATTTGTCCTTTCATTGGATCAATCCTTGCTGCTTGGCTGTTTCGTGCCGTCTTCCCTCCACAACAAGTGGTAAAAAAACAGAAGAAAGCCTAA 744 0.3978 MVNAIKAAIGDFVLTFIWMFISSTLGLVTTEIMKAFDLQFVTYNGVNYPFIIITTCLIFLIIFTFTAIGNAMGGASFNPTGNASFYAAGLGSDTLISMALRFPAQALGAVGGAMAIKEVIPPKYSHMIGGPGLKVDVHTGAIAEGVLTFVITFAVLFIVLRGPRSEFMKTLLLAMSTVSMILAGSAYTGPSMNPILAYGWAYLDNWHHSWDQFYVYWICPFIGSILAAWLFRAVFPPQQVVKKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3780 247 SUPERFAMILY Aquaporin-like 3 238 IPR023271 -
Mal8g3780 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Mal8g3780 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Mal8g3780 247 Gene3D Glycerol uptake facilitator protein. 1 246 IPR023271 -
Mal8g3780 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal8g3780 247 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3780 Mal-Chr8 109759110 109763987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3780 1 235 Major Intrinsic Protein MIP AT3G04090 55.745 4.89e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3780 K09875 - gmx:100788738 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3150 3 107008920 107013340 Mal8g3780 8 109759110 109763987 PCT