Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3748 ATGGGTTGTGCACTCTCTTGCCAAAAATCCCTATATTCTCCTCTAAATTGTGAAATAGACTTGAAGGTGTTTAGTTATAAAGATTTGAAAGTTGCTACCAAGAATTTTAAGAAAGATGCATTCCTTGGTGAAAGTGGTTTTGGTAGAGTTTACAAAGGTCAGTTGGACGCAAGATTCGCCGCTAACAAAGCTCGCCAAATGGTAGCCATAGGGAAAGTGACTTTTGTCGATTTGAATTCCGATAATTTGCAACAAGAAATCAATTTTTTAGGATCGATTTCTCACCTAAATGTGGCCAAGCTGTTGGGATACTGCAAAGAAGAAGGCAAACTTCTACTTGTGTACGAGTTTATGCAAAGTGGAAGCTTGGGGAACCATCTTTTTTAA 387 0.3824 MGCALSCQKSLYSPLNCEIDLKVFSYKDLKVATKNFKKDAFLGESGFGRVYKGQLDARFAANKARQMVAIGKVTFVDLNSDNLQQEINFLGSISHLNVAKLLGYCKEEGKLLLVYEFMQSGSLGNHLF* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3748 128 ProSiteProfiles Protein kinase domain profile. 36 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal8g3748 128 SUPERFAMILY Protein kinase-like (PK-like) 12 127 IPR011009 -
Mal8g3748 128 Gene3D Phosphorylase Kinase; domain 1 5 117 - -
Mal8g3748 128 PANTHER OS01G0588500 PROTEIN-RELATED 16 128 - -
Mal8g3748 128 Pfam Protein tyrosine and serine/threonine kinase 39 127 IPR001245 GO:0004672|GO:0006468
Mal8g3748 128 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 16 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3748 Mal-Chr8 108303284 108303670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3748 24 128 Receptor kinase-like Gene Family AT3G45430 45.283 4.15e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal8g3748 PK_Tyr_Ser-Thr 2.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g3748 - - fve:101300299 119.012