Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g3729 ATGAATGATCTTTGGAGCATGATTTGTGGAGACTGTGGTTTTTCTGAGACAGGAGGAAAACCATTTTGTTATGATTTAAGACTTCTGAAAGATCCTTCCTCATGCATTAACCATTTGTTGGTAATTTTCTTTGATGTGTTCCTGCTGTTGATGTTATCATTCATCATGATCCTGAAGTCTTCCTCGAGACCCTTAAGAAGTCGAGTACGATATTCGAACTTGCAGTTAGTTTCTGCTATAACCAATGGTGTTCTTGGGTCGTTGCGTTTATTCTTAGGAATTTGGGTTTTAGAGGAGAAGTTAAGGAAAAACCATGAAGTGTTTCCTCTTAATGGATGGTTGCTAGAACTCTTTCATGGATTCACATGGTTGTCGGTAAGTTTATCTGTCAGCCTTCGGATAAAACAACTAACAAGAACATGGTTGTGGATGTTTTCTATTCTCATGTTTTTTGTTTCTGGTATGTTATGTGTTTTATCTATGTCTTATGCAATTACGAGCAGCGAACTGTCCCTCGAGGCAGCTTTAGACGTTCTATCGTTTCCGGGAGCAACTTTACTGCTGATATGCACATACAAAGCATGTACAAGTGAAGTTGATCCTGTAAATGGTGAAAGCCTTTATGCTCCTTTAAATGGTCAGTACAATGAAGTTGATTCGATTAGCAATGTAACCCCATTTTCCAAAGCCGGATTCTTTAGTAAGATTTCGTTTTGGTGGTTGAATCCATTTATGAAAAGGGGTCAAAAGAAAACACTTCTAGATGAGGATATCCCAAAGTTACGAGAGTTTGACCGAGCAGAAAGTTGTTATATGTCATTTGTGGAACAGTTAGATAAAAAAAAACAACATGAACCATCATCACATTCATCGGTTTTATGGACAATAATTTTGTGCCACAAGAGAGAGATTTTGATAACAGGATTCTTTGCTTTGCTCAAGGTACTCACTTTATCTTCCGGTCCTCTACTTCTGAATCAATTTATATTGGTTGCTGAAGGTAATAAAAGTTTCGAATATGAAGGTTATGTATTGGCCATATCACTCTTCTTTATAAAGATCGTAGAATCCCTATCACAAAGACAATGGTATTTCCGCAGTAGACTTGTTGGGGTGAAAGTTAGATCACTACTTACTGCAGCCATTTATAAGAAAATGTTACGGCTATCCAATTCTTCGAGATTGATTCACTCTGGTGGTGAGATAATGAATTATATGACTGTGGATACTTATAGAATCGGAGAATTTCCATTCTGGTTTCACCAGACTTGGACAACAAGTCTCCAATTGTGTATTGCATTAGTAATTCTTTTCCGCACAATTGGACTAGCAACACTAGCATCATTGGCAGTGATAATTCTCACTGTCCTTTGCAACACTCCACTAGCAAAGTTGCAGCACAAGTTTCAAAGCAAACTTATGGAGGCACAAGATGAGCGATTAAAGGCTAGTTCTGAGGCTCTCGTGAATATGAAAGTGTTGAAGTTATATGCATGGGAAACACATTTCAAAAATGTTGTAGATTACTTAAGAAATGTGGAACTCAAATTGTTATCGTCTGTGCAATTTAGAAGAACATACCATATGTTTTTCTTTTGGACCTCGCCGATGTTGGTATCTTGTGCTTCTTTTCTGGCATGTTACTTCTTGAATATTCCTCTGAATGCAAGTAATGTTTTCACTTTTGTGGCAACTTTGCGCCTTGTTCAAGAACCAGTTTCAAGCATCCCCGATGTTATTGCAGTCATCATTCAGGCAAAGGTTGCATTTGCTCGGATTGTTAGTTTCCTTGAGGCACCAGAACTGCAGAGAGAAAATTTCAGGAAAAGATGCTTTAATGTCAACCTCGAAGACTCGATTTCAATAAAATGTGCTGATTTTTCATGGGAAGGTAATGCATCAAAGCCAACACTGAGGAACATAAATTTGGACGTTAAATGTGGGCAAAAGGTGGCTATTTGTGGAGAAGTTGGCTCAGGAAAATCAACCCTCTTGGCAACAATTCTTGGAGAAGTTTCCAAAACTAAGGGAACTATTGATGTTCATGGGAAGTTTGCATATGTTTCTCAAACAGCATGGATACAAACAGGAACACTACGGGAGAATATTTTGTTTGGATCTGAGTTCGATGAACTAAGATATCAAGAAACACTTCGAAGGTCTTCACTGGTAAAGGACCTTGAGTTGTTTCCCTATGGTGACCTCACTGAAATAGGCGAGAGAGGAGTTAATTTAAGCGGAGGTCAAAAGCAACGAATTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTATTAGATGATCCATTTAGCGCTGTTGATGCACATACTGCAAAAAATTTGTTTAATGAATACATCATGGAAGGACTCAAAGGGAAAACAGTCTTACTCGTGACTCATCAAGTCGACTTCCTCCCAGCATTTGATTCTATTTTGTTGATGTCTTTTGGGTCAATCCTACAAGCTGGTTCATATAACCAGCTATTGAACTCAAGCAAAGAATTCAATGAACTCGTCCATGCTCACAAAGAAACTTCTGGTTCTGACCAACTTGCAAGTGCTACTTCTTCTCCGAGACATTCAACTTCCAGAAAGAGTACGCAAGCTTCCGCGTTGAAGCAGTTTAAAGCACCAAATGGAAATCAATTAATTCAGCAAGAAGAGAGAGAGAAAGGAGACAGAGGATTGAAGCCTTACTTACAATATCTGAATAAGATGAAAGGCTATATATTATTCTCTACAGCTTCCCTTTGTCACCTTATTTTTGTGGTTGGTCAGATATTGCAAAACTCATGGATGGCTGCTAAAGTTGACGATCCCAATGTCAGCACGTTGCAACTGATTTTGATTTATTTCCTTATCGGTGTTTTTTCATCAGTTTTCTTGTTCATCAGATGTCTACTTGTAGTTACTTTAGGTCTTCAATCATCGAAAGATTTATTTTCACAGTTGATTAACTCCCTCTTTCGTGCTCCGATGTCATTTTACGACTCTACACCATTGGGAAGGGTACTTAGCAGGGTCTCATCTGATCTGAGTATTATGGATATTGACATTCCATTTAGCCTCACTTTTGCTGTGGCGGGTACTATCGGTTTATATTCTAATCTTACAGTTTTGGCGGTTGTCACATGGCAAGTCTTGGTTGTGGCTATACCAATGGTTTATGCTGCAATTCGGTTGCAGGGATACTACTTTGCTTCAGCAAAAGAAGTAATGCGGTTGAATGGCACAACAAAATCCTCTTTAGCGAATCATGTAGCCGAAACTGTTGCTGGAGCTGTAACAATCAGGGCTTTTGAGGAGGAAGATCGTTCGTTTGAGAAGAACCTTAATCTAATTGATAATAATGCTAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTTGTTCTCGCCGCTGCAACACTTTGCCTGGTTATGCTCCCCCCTGGAACTTTCCCCTCAGGAATTATTGGCATGGCTCTAACTTACGGCCTATCACTAAACGGCGCCTTAATATTTGCAATTCAAAATCAATGCACTCTTGCTAATCACATAATATCAGTAGAGAGGCTAAATCAATATATGCATATACAAAGTGAGGCTGAAGAAATCGTAGAAGAAAATCGTCCTCCTTTGAATTGGCCAGTTTCAGGCAAAGTAGAAATAAATAACTTGAAGATACGATACAGACATGGCGGACCACTTGTACTTCATGGGATCACATGCACATTTCAAGCAGGTCACAAGATTGGTATTGTCGGAAGAACAGGAAGTGGGAAGTCCACTCTTATTGGTGCTTTATTTCGTCTTGTGGAACCAGCGGGAGGAAAAGTTGTAGTCGATGGCATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCACGTTTTGGGATTATACCTCAAGATCCTACCCTTTTCAACGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACATACTGATCAAGAGATATGGCAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGAAGAGGGTTTAGACTCCTCAGTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAGTTATTCTGTTTGGGACGTGCTCTTTTGAGGAGAAGTAGGATATTGGTATTGGACGAAGCAACTGCATCAATCGATAACTCTACTGATCTAATCGTGCAAAAAACCATTAGGGCTGAGTTCGCAGATTGTACAGTGATCACAGTAGCACACAGAATACCAACTGTGATGGATTGCAATATGGTTCTCGCTATAAGTGATGGAAAATTGGCGGAGTATGATGAACCAACGAGCTTGATGAAGAGAGAAGACTCGATGTTCAGGCAGCTTGTCAAGGAATACTGGTCTCATTTTCAGTCTGCAGAATCGCATTGA 4425 0.3948 MNDLWSMICGDCGFSETGGKPFCYDLRLLKDPSSCINHLLVIFFDVFLLLMLSFIMILKSSSRPLRSRVRYSNLQLVSAITNGVLGSLRLFLGIWVLEEKLRKNHEVFPLNGWLLELFHGFTWLSVSLSVSLRIKQLTRTWLWMFSILMFFVSGMLCVLSMSYAITSSELSLEAALDVLSFPGATLLLICTYKACTSEVDPVNGESLYAPLNGQYNEVDSISNVTPFSKAGFFSKISFWWLNPFMKRGQKKTLLDEDIPKLREFDRAESCYMSFVEQLDKKKQHEPSSHSSVLWTIILCHKREILITGFFALLKVLTLSSGPLLLNQFILVAEGNKSFEYEGYVLAISLFFIKIVESLSQRQWYFRSRLVGVKVRSLLTAAIYKKMLRLSNSSRLIHSGGEIMNYMTVDTYRIGEFPFWFHQTWTTSLQLCIALVILFRTIGLATLASLAVIILTVLCNTPLAKLQHKFQSKLMEAQDERLKASSEALVNMKVLKLYAWETHFKNVVDYLRNVELKLLSSVQFRRTYHMFFFWTSPMLVSCASFLACYFLNIPLNASNVFTFVATLRLVQEPVSSIPDVIAVIIQAKVAFARIVSFLEAPELQRENFRKRCFNVNLEDSISIKCADFSWEGNASKPTLRNINLDVKCGQKVAICGEVGSGKSTLLATILGEVSKTKGTIDVHGKFAYVSQTAWIQTGTLRENILFGSEFDELRYQETLRRSSLVKDLELFPYGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTAKNLFNEYIMEGLKGKTVLLVTHQVDFLPAFDSILLMSFGSILQAGSYNQLLNSSKEFNELVHAHKETSGSDQLASATSSPRHSTSRKSTQASALKQFKAPNGNQLIQQEEREKGDRGLKPYLQYLNKMKGYILFSTASLCHLIFVVGQILQNSWMAAKVDDPNVSTLQLILIYFLIGVFSSVFLFIRCLLVVTLGLQSSKDLFSQLINSLFRAPMSFYDSTPLGRVLSRVSSDLSIMDIDIPFSLTFAVAGTIGLYSNLTVLAVVTWQVLVVAIPMVYAAIRLQGYYFASAKEVMRLNGTTKSSLANHVAETVAGAVTIRAFEEEDRSFEKNLNLIDNNASAFFHSFASNEWLIQRLETISAVVLAAATLCLVMLPPGTFPSGIIGMALTYGLSLNGALIFAIQNQCTLANHIISVERLNQYMHIQSEAEEIVEENRPPLNWPVSGKVEINNLKIRYRHGGPLVLHGITCTFQAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKVVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHTDQEIWQVLGKCQLREVVQEKEEGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLIVQKTIRAEFADCTVITVAHRIPTVMDCNMVLAISDGKLAEYDEPTSLMKREDSMFRQLVKEYWSHFQSAESH* 1475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g3729 1474 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Mal8g3729 1474 SUPERFAMILY ABC transporter transmembrane region 293 598 IPR036640 GO:0005524|GO:0016021
Mal8g3729 1474 Pfam ABC transporter 1245 1393 IPR003439 GO:0005524
Mal8g3729 1474 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524
Mal8g3729 1474 Gene3D ABC transporter type 1, transmembrane domain 274 598 IPR036640 GO:0005524|GO:0016021
Mal8g3729 1474 Gene3D ABC transporter type 1, transmembrane domain 876 1210 IPR036640 GO:0005524|GO:0016021
Mal8g3729 1474 CDD ABCC_MRP_domain1 620 816 - -
Mal8g3729 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1217 1462 IPR027417 -
Mal8g3729 1474 CDD ABCC_MRP_domain2 1226 1446 - -
Mal8g3729 1474 MobiDBLite consensus disorder prediction 848 870 - -
Mal8g3729 1474 Pfam ABC transporter transmembrane region 305 572 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3729 1474 Pfam ABC transporter transmembrane region 917 1154 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3729 1474 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 70 1474 - -
Mal8g3729 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1228 1462 IPR003439 GO:0005524
Mal8g3729 1474 SUPERFAMILY ABC transporter transmembrane region 899 1211 IPR036640 GO:0005524|GO:0016021
Mal8g3729 1474 Gene3D - 1211 1464 IPR027417 -
Mal8g3729 1474 CDD ABC_6TM_ABCC_D1 306 593 IPR044746 GO:0140359
Mal8g3729 1474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 842 IPR027417 -
Mal8g3729 1474 CDD ABC_6TM_ABCC_D2 919 1203 IPR044726 GO:0140359
Mal8g3729 1474 Gene3D - 599 867 IPR027417 -
Mal8g3729 1474 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 622 843 IPR003439 GO:0005524
Mal8g3729 1474 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 585 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal8g3729 1474 SMART AAA_5 1254 1446 IPR003593 -
Mal8g3729 1474 SMART AAA_5 647 820 IPR003593 -
Mal8g3729 1474 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 70 1474 - -
Mal8g3729 1474 MobiDBLite consensus disorder prediction 846 870 - -
Mal8g3729 1474 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 922 1191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g3729 Mal-Chr8 107785229 107791340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal8g3729 620 868 Calmodulin-binding Proteins AT2G36910 29.057 2.24e-26 116